Novosphingobium sp. THN1: C7W88_05945
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Entry
C7W88_05945 CDS
T05635
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
not
Novosphingobium sp. THN1
Pathway
not01501
beta-Lactam resistance
not01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
not00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C7W88_05945
01503 Cationic antimicrobial peptide (CAMP) resistance
C7W88_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
not03036
]
C7W88_05945
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
not02000
]
C7W88_05945
01504 Antimicrobial resistance genes [BR:
not01504
]
C7W88_05945
Chromosome and associated proteins [BR:
not03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C7W88_05945
Transporters [BR:
not02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C7W88_05945
Antimicrobial resistance genes [BR:
not01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C7W88_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_RND
BSH_CzcB
BSH_CusB
CzcB_C
HH_MFP_RND
Biotin_lipoyl
HH_EMRA
HH_YBHG
BSH_YknX
Beta-barrel_AAEA
HH_CzcB
DUF4330
DUF3811
Motif
Other DBs
NCBI-ProteinID:
AXU18686
LinkDB
All DBs
Position
1199083..1200255
Genome browser
AA seq
390 aa
AA seq
DB search
MNYETTINADNAASPMFDGEGDGQRSSRRLWIIGAVVVAVLAGVWFLMHRGDGNAAADAQ
ESQAQVVTVVVPGTTTIAGTITASGTIAARREMPVGVAGEGGQIVQVLVDAGDWVRAGQV
LAVIDRSVQGQQIASQAANVEVAAADARLAQANLDRALKLVERGFISKADIDRLTATRDA
ANARVRVARASLGELGARAARLNIVAPAAGLVLTRAAEPGQIVTPGSGVLFSMARDGQME
MQARLSESDLARLSVGASADVTPVGTDRKFSGQVWQLSPTIDQTSREGIARIALAYDKVL
RPGGFATATLVSGTTNAPLLPESAILSDDKGSYVFVIDKDDKAVRRAVKTGQVSAKGIAV
VEGLSGSERIVLRAGGFLNPGDKVRPVVQK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgaaacgacgatcaacgccgacaacgcagcctcgcccatgtttgacggagag
ggtgacggtcagcggtcgtcccgacggctctggatcatcggcgcggttgttgtggcggtc
ctggccggggtgtggttcctgatgcaccggggcgatggcaatgccgccgctgatgcgcag
gaatcgcaggcgcaggtcgtgaccgtcgtggtgcccggcaccaccaccatcgccggaacc
atcacggccagcggcacgattgccgcgcggcgcgagatgccggtcggggtcgccggagaa
ggcgggcagatcgtccaggtgctggtcgatgcgggcgactgggtccgtgcaggccaggtc
cttgccgtgatcgaccggtcggtgcagggccagcagatcgcgagccaggccgcaaacgtc
gaagtggccgccgccgatgcccgcctcgcgcaggccaacctcgatcgtgcgctgaagctg
gtggagcgcggcttcatctcgaaggcggacatcgaccggctcactgccacccgcgacgca
gccaatgcgcgggtgcgcgtggcacgggcgagccttggcgaactcggcgcccgcgccgcg
cgcctgaacatcgtcgcgccggcggcgggccttgtcctgacgcgcgcggccgaaccgggc
cagatcgtcactccgggttcgggtgtcctgttctcgatggcgcgtgatgggcagatggaa
atgcaggcgcgcctgtcggagtccgatcttgcgcgtctttccgtcggggcgagcgcggac
gtcacgccagttggcacagaccgcaagttctcgggccaggtctggcagctctcgccgacg
atcgaccagaccagtcgcgaagggatcgcgcgcattgcccttgcctacgacaaggtcctg
cgccccggcggttttgccaccgcaacgctggtgtcgggcacgaccaatgccccgcttctc
ccggaatcggccatcctcagcgacgacaagggctcatacgtcttcgtgatcgacaaggac
gacaaggcggtccgccgcgcggtcaagaccggtcaggtcagtgccaaaggcatcgccgtg
gtcgaaggcctttcgggcagcgaacggatcgtgctgcgggccggcggcttcctcaatccg
ggggacaaggtccggccggtcgttcagaaataa
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