Novosphingobium sp. P6W: TQ38_003475
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Entry
TQ38_003475 CDS
T05550
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TQ38_003475 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_003475 (nth)
Enzymes [BR:
nov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TQ38_003475 (nth)
DNA repair and recombination proteins [BR:
nov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TQ38_003475 (nth)
Prokaryotic type
TQ38_003475 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AXB75692
UniProt:
A0A2Z5E7U0
LinkDB
All DBs
Position
1:696165..696824
Genome browser
AA seq
219 aa
AA seq
DB search
MKKADVFEFFRRLAEANPSPETELEYGNTYQLLVAVTLSAQSTDVGVNKATRALFREVKT
PAQMVELGEEGLKQHIKTIGLFNTKAKNVIALSQILVDRHGGEVPADRDAMVELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAKGKTPLAVELQLEKKVPQPFRVGAHHWLI
LHGRYICKARTPECWRCPEVDLCAFKDKSVERGTKKAAA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggccgacgtcttcgaattcttccgccgtctcgccgaggccaatccctcgccc
gaaacggagctggagtatggcaatacctaccagttgctggtggcggtgacgctgtccgcg
caatccaccgatgtgggcgtcaacaaggcgacgcgggcgctgtttcgcgaagtgaagacg
cccgcgcagatggtcgaactgggcgaggaaggcctcaagcagcacatcaagaccatcggc
ctgttcaacaccaaggcgaagaacgtcatcgccctttcgcagatcctcgtcgaccggcac
ggcggcgaggttccggcggaccgcgacgccatggtcgaattgccgggcgtgggacgcaag
accgccaacgtggtgatgaactgcgccttcggggcggagaccttcgcggtcgacacgcac
atattccgcgtcggcaaccgcaccggccttgccaagggcaagacgccgctggcggtcgaa
ttgcagcttgagaagaaagtgccgcagccctttcgcgtcggcgcgcatcactggctgatc
ctgcacggccgctacatctgcaaggcgcgcacgcccgagtgctggcgttgcccggaagtg
gacctctgcgctttcaaggacaaatcggtggagcggggcacgaaaaaggccgcagcctga
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