Novosphingobium sp. P6W: TQ38_017600
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Entry
TQ38_017600 CDS
T05550
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nov
Novosphingobium sp. P6W
Pathway
nov01501
beta-Lactam resistance
nov01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TQ38_017600
01503 Cationic antimicrobial peptide (CAMP) resistance
TQ38_017600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nov03036
]
TQ38_017600
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_017600
01504 Antimicrobial resistance genes [BR:
nov01504
]
TQ38_017600
Chromosome and associated proteins [BR:
nov03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
TQ38_017600
Transporters [BR:
nov02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
TQ38_017600
Antimicrobial resistance genes [BR:
nov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TQ38_017600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
HH_YBHG
BSH_CusB
YknX_C
Beta-barrel_RND_2
HH_EMRA
GO-like_E_set
Motif
Other DBs
NCBI-ProteinID:
AXB78465
LinkDB
All DBs
Position
2:complement(257479..258642)
Genome browser
AA seq
387 aa
AA seq
DB search
MKKITPALVLLLSACGGGGEQAAPAGPPEVGVVTVREEAVVISTELPGRTSAYETSDVRP
QVSGLILQRLFTEGDQVSAGQALYRIDPAPYEAQVASARAALGRARAAIASTAALSRRYN
ELVKINAISRQDAENAVVGAQQAQADVAAQQAALRTAQIDLGRTTVRAPISGRIGRSTFT
TGALVSASQADALTTIQKIDPIFVDIQQSSADVLRLRQQLLSGEISREGGAARVRLKLED
GSAYPQEGVLKFTDVSVDPTTGSQVVRAQFPNNGGLLLPGMYVRAELVEGTRSNGILIPQ
AAVTRDERGSPTVLVVGAQGKVEGRKITAPRTVGTNWLVTGGLKAGEKVIVEGAQNARPG
AAVKAVPAQQAKPGGNAPAGQQPKQGQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcaccccggccctggtgctgcttctgtccgcttgtggaggaggaggcgaa
caggccgcgcccgcaggcccgcccgaagtcggcgtggtgaccgtgcgtgaggaagccgtg
gtgatcagcaccgaacttcccggccgtaccagcgcttacgagacttctgacgtgcgtccg
caggtcagtgggttgatcctgcaacgcctgttcaccgaaggcgatcaggtcagtgccgga
caggcactttatcgcatcgatccggcgccttacgaagcgcaggtggcaagtgcccgcgcg
gcgctgggccgcgcccgcgcggcgatcgcttccaccgccgccctttcgcggcgctataac
gagctggtcaagatcaacgcgatttcccgccaggatgccgagaacgcagtcgtgggcgcg
cagcaggcccaggccgacgtcgccgcccagcaggccgcgcttcggaccgcccagatcgat
ctgggccgcaccaccgtgcgcgcgccgatttcgggccgcatcggccgttcgaccttcacg
accggcgctctcgtttcggcttcgcaggccgatgcgctgaccacgatccagaagatcgac
ccgatcttcgtggacatccagcagtccagtgcggacgttctcaggctgcgccagcagttg
ctctcgggcgaaatctcgcgcgagggcggcgccgcgcgcgttcgcctgaagctggaagac
ggcagcgcctatccgcaggaaggcgtgctcaagtttaccgacgtcagcgtcgatcccacc
accggcagccaggtcgtgcgggcgcagttccccaataacggcggcctgctgcttcccggc
atgtacgtgcgcgccgaactggtcgaaggcacccgtagcaatggcatcctgatcccgcag
gccgccgttacgcgcgacgagaggggcagccccacggtgctggtcgtcggcgcccagggc
aaggtcgaaggccgcaagatcaccgcgccgcgcacggtcggcaccaactggctggtcacc
ggcggcctgaaggcgggcgaaaaggtcatcgtcgaaggggcacagaacgcgcgtcccggc
gcggcggtcaaggccgttccggcgcagcaggcaaagcccggcggtaacgctccggcgggc
cagcagccgaagcaggggcagtaa
DBGET
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