Novosphingobium sp. BL-52-GroH: ACFFDA_18475
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Entry
ACFFDA_18475 CDS
T11269
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00020
Citrate cycle (TCA cycle)
novb00785
Lipoic acid metabolism
novb01100
Metabolic pathways
novb01110
Biosynthesis of secondary metabolites
novb01120
Microbial metabolism in diverse environments
novb01200
Carbon metabolism
novb01210
2-Oxocarboxylic acid metabolism
Module
novb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
novb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ACFFDA_18475
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ACFFDA_18475
Enzymes [BR:
novb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
ACFFDA_18475
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
XKH14678
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All DBs
Position
1:1240677..1243526
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AA seq
949 aa
AA seq
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MGDESFEFTPDEGLGEPQAGPSWQRGTWPLVGGDAEDDWTQGLDPTVLKAEIVKAAAKGG
AKVDQSRIDEAAADAFRAMTLIRTYRVRGHLAANLDPLGLNQRKLPADLTPEFHGFVGAA
QDRKVYVGGTLGLEWATVREIVQILRANYCGKVGLEYMHIADTEERKFLQDRMEGADKEI
EFTPEGKKAILAAVVRGEQYEKFLGKKYVGTKRFGLDGGESMIPALEAVIKYGGSLGVKE
IVYGMAHRGRLNVLANVLAKPYKVIFHEFSGGTANPEDVGGSGDVKYHLGTSADREFDGI
KVHMSLMPNPSHLETVDPVVLGKVRAYQVIADDIGDDVGPNARHKQVLPVLIHGDAAFAG
QGVIWECFGLSGVKGYNTGGCIHFIINNQIGFTTSPQFARNSPYPSDVAKGVQAPILHVN
GDDPAAVTFACKLAIDYRQTFGRDIVIDMWCYRRFGHNEGDEPGFTQPLMYAKIRQHPPV
SKIYADRLKGEGVIDDSFLPQTEEAFTAHLEEQFEAAKTYKANQADWFSGQWSGFHKPAD
PETARRNVDTRIEPKLFESLGRTLTTVPEGLTVHKTLARVLAAKEEMFKTGEGFDWATAE
ALAFGSLVTEGYGVRLSGQDCGRGTFSQRHAVWTDQTDEHKYVPLTTLPHGRFEVLDSTL
SEYGVLGFEYGYASADPKTLVLWEAQFGDFANGAQIIIDQYVASAESKWLRANGLVMLLP
HGYEGQGPEHSSARLERYLQLCAQDNIQVCNITSPANYFHVLRRQMRRPFRKPLVIMTPK
SLLRHPLAKSSAAEFLEGDFKRILSDRNGSADEATKKVILCSGKVFYDLLEARDAAEITD
TQIIRLEQLYPFPGEPLAKRLSKMPNLEEIVWCQEEPKNNGSWFFVEPFIEASAKEAGVS
APRPRYAGRSASASPATGLAKRHTAEQAALVADALHLSVRSELRRKQKA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgagagtttcgaattcacccccgacgagggcctcggtgaaccccaggccggc
ccgagctggcagcgcggcacctggcccctcgtcggcggcgacgccgaggacgactggacg
caaggcctcgaccccacggtcctcaaggccgagatcgtcaaggcagccgccaagggcggc
gccaaggtcgaccagtcgcgcatagacgaagcggcggccgatgccttccgcgcgatgacg
ctgatccgcacgtatcgcgtgcgcggccacctcgcggcgaacctcgacccgctcggcctc
aaccagcgcaagctgcccgccgacctcactcccgaattccacggcttcgtcggcgccgcg
caggaccgcaaggtctatgtcggcggcaccctcggcctcgaatgggcgaccgtgcgcgag
atcgtgcagatcctgcgcgccaactactgcggcaaggtcggcctcgagtacatgcacatc
gccgataccgaggagcgcaagttcctgcaggatcgcatggaaggcgccgacaaggagatc
gagttcacgcccgagggcaagaaggcgatcctcgcggccgtcgtgcgcggcgagcagtac
gagaagttcctcggcaagaagtacgtcggcaccaagcgcttcggcctggacggcggcgag
tcgatgatccccgcgctcgaggccgtcatcaagtacggcggctcgctgggcgtcaaggag
atcgtctacggcatggcccaccgcggccgcctgaacgtcctcgcgaacgtcctcgccaag
ccctacaaggtcatcttccacgagttctcgggcggcaccgccaatcccgaggacgtgggc
ggctcgggcgacgtgaagtaccacctgggcacgtcggccgaccgcgagttcgacggcatc
aaggtccacatgagcctgatgcccaacccctcgcacctcgagacggtcgacccggtcgtg
ctcggcaaggtccgcgcctaccaggtgatcgccgacgacatcggcgacgacgtcggcccg
aacgcgcgccacaagcaggtccttcccgtgctcatccacggcgacgcggccttcgccggc
cagggcgtcatctgggagtgcttcggcctctcgggcgtcaagggctacaacaccggcggc
tgcatccacttcatcatcaacaaccagatcggcttcacgacgagcccgcagttcgcgcgc
aactcgccgtacccctcggacgtcgccaagggtgtccaggcgccgatcctgcacgtcaac
ggcgacgatccggccgcggtgaccttcgcctgcaagctggcgatcgattaccgccagacc
ttcggccgcgacatcgtgatcgacatgtggtgctatcgtcgcttcggccacaacgagggc
gacgagcccggcttcacgcagccgctgatgtacgccaagatccgccagcacccgccggtg
tcgaagatctacgccgaccgcctcaagggcgaaggcgtgatcgacgacagcttcctgccc
cagaccgaggaggccttcaccgcccacctcgaggagcagttcgaggcggccaagacctac
aaggccaaccaggccgactggttctccggccagtggagcggcttccacaagcccgccgat
cccgagaccgcgcgccgcaacgtcgacacccgcatcgaacccaaactgttcgagagcctg
ggccgcacgctgacgacggtgcccgaaggcctgaccgtccacaagacgctggcccgcgtg
ctcgccgccaaggaagagatgttcaagaccggcgagggcttcgactgggccactgccgag
gcgctcgccttcggcagcctcgtcaccgagggctacggcgtgcgcctgtccggccaggat
tgcggtcgcggcacgttctcgcagcgccacgcggtctggaccgaccagaccgacgagcac
aagtacgtgcccctgaccacgctgccgcacggccgcttcgaggtgctggattcgacgctt
tcggaatatggcgtgctcggcttcgagtacggctacgccagcgccgaccccaagaccctg
gtgctgtgggaagcgcagttcggcgacttcgccaacggcgcgcagatcatcatcgaccag
tacgtcgcctcggccgaatccaagtggctgcgcgcgaacggcctcgtcatgctgctgccg
cacggctacgagggccagggtcccgagcactcctcggcccgcctggaacgctacctgcag
ctctgcgcgcaggacaacatccaggtctgcaacatcaccagcccggcgaactacttccac
gtcctgcgccggcagatgcgccgtccgttccgcaagccgctggtcatcatgactcccaag
tcgctgctgcgccatccgctggcgaagtcctcggccgccgagttcctcgaaggcgacttc
aagcgcatcctctccgaccgcaacgggtcggccgacgaggcgacgaagaaggtcatcctg
tgctcgggcaaggtcttctacgacctgctcgaagcgcgcgacgccgccgagatcaccgac
acccagatcatccgcctcgaacagctctaccccttcccgggcgagccgctggccaagcgt
ctgtcgaagatgccgaacctggaggagatcgtctggtgccaggaggagccgaagaacaac
ggttcctggttcttcgtcgagcccttcatcgaagcctccgccaaggaagcgggcgtctcg
gccccgcgtccgcgctatgccggccgctcggcctcggcatcgcctgctaccggcctcgcc
aagcgccacaccgccgaacaggcggcgctggtcgccgacgcgctgcatctttccgtccgt
tccgaactccgtcgcaagcagaaggcttga
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