Novosphingobium sp. BL-52-GroH: ACFFDA_22130
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Entry
ACFFDA_22130 CDS
T11269
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb01501
beta-Lactam resistance
novb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACFFDA_22130
01503 Cationic antimicrobial peptide (CAMP) resistance
ACFFDA_22130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
novb03036
]
ACFFDA_22130
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_22130
01504 Antimicrobial resistance genes [BR:
novb01504
]
ACFFDA_22130
Chromosome and associated proteins [BR:
novb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ACFFDA_22130
Transporters [BR:
novb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ACFFDA_22130
Antimicrobial resistance genes [BR:
novb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ACFFDA_22130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF4330
SNARE
RnfC_N
Cep57_CLD_2
Motif
Other DBs
NCBI-ProteinID:
XKH12206
LinkDB
All DBs
Position
1:1978218..1979420
Genome browser
AA seq
400 aa
AA seq
DB search
MNYDSKIEAHAGGHESFDATGNPLVDDAHDRASRRWIWIVAVVVLALVVAVWFFVHGGTD
ESAAGKDAAQVPVVSVVVPGRSIVAGEISATGSLAARRSMPVGSVGEGGEVREIRVEAGD
WVQQGQVLAVIDRSVQTQAAASQSAQVAVAAADARIAQSNLDRGLKLVDRGFISKADIDR
LTATRDAAVARVDVARATLGQLRAQNARLNIVAPAAGLVLERNVEMGQVVSGGSGVLFRL
AKGGEMELLANLSEDDLAALSVGVEAKVTPVGSGRTFIGQVWQLSPIIDTTTRQGTARIA
LKFDPALRPGGFASAVIESGAVVAPMLPESAIQSDAKGAFVYVVDTAGKVHRRPVKTGLV
TGNGIIVTSGLAGNEKIVLRAGGFLNDGDKVKTRLVAAAN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgacagcaagattgaagcccacgcgggcggacacgagtcattcgacgcaacc
ggcaatccgctggtcgacgacgcgcacgatcgcgcatcgcgccggtggatatggatcgtc
gcggtggtcgtgctcgccctcgtcgtcgcggtctggttcttcgtacatggcggtaccgac
gaaagcgcggcaggcaaggacgcggcgcaagtgccggtcgtctccgtcgtcgtgcccggc
cgctccatcgtcgccggcgagatcagcgcgaccggctcgctcgccgcgcgccgctcgatg
ccggtcggatcggtgggcgaaggcggcgaggtccgcgagatccgcgtcgaggcgggcgac
tgggtccaacagggccaagtcctcgcggtgatcgaccgctcggtgcagacgcaggccgcg
gccagccagtccgcccaggtggccgtcgccgccgccgacgcgcgcatcgcccagtccaac
ctcgatcgcgggctcaagctggtcgatcggggcttcatctccaaggccgacatcgatcgc
ctcaccgccacgcgcgacgccgccgtcgcccgcgtcgacgtcgcccgcgccaccctgggc
cagctgcgcgcccagaacgcccgcctcaacatcgtcgccccggccgccggcctcgtgctc
gaacgcaacgtcgagatgggccaagtggtgagcggcggcagcggcgtactgttccgcctc
gccaagggcggcgagatggaactgctcgccaacctttcggaagacgatctcgcggcactt
tctgtgggggtagaggccaaggtcacgccggtcggctcgggccgcaccttcatcggccag
gtctggcagctctcgcccatcatcgacaccaccacccgccagggcaccgcgcgcatcgcg
ctcaagttcgacccggccctgcgtcccggcggcttcgccagcgcggtgatcgaaagcggc
gcggtggtggcgccgatgctgcccgaatccgcgatccagagcgacgccaagggcgccttc
gtctatgtcgtcgacaccgccggcaaggtccatcgccgcccggtcaagaccgggctggtc
acgggcaacggtatcatcgtcacatcgggcctcgcgggcaacgagaagatcgtgctgcgc
gccggcggattcctgaacgacggggacaaggtcaagacccggcttgtcgccgccgccaac
tga
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