Novosphingobium sp. BL-52-GroH: ACFFDA_26830
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Entry
ACFFDA_26830 CDS
T11269
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00300
Lysine biosynthesis
novb00550
Peptidoglycan biosynthesis
novb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACFFDA_26830
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACFFDA_26830
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
novb01011
]
ACFFDA_26830
Enzymes [BR:
novb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ACFFDA_26830
Peptidoglycan biosynthesis and degradation proteins [BR:
novb01011
]
Precursor biosynthesis
Amino acid ligase
ACFFDA_26830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XKH13076
LinkDB
All DBs
Position
1:2935954..2937426
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AA seq
490 aa
AA seq
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MKLSAICSAAGLPPVATDANVTGFAIDNRKVAPGTVFGAFRGTKFNGEDFIAAAVEAGAV
AVVAHPDAHVEGVIHFADEEPRRLFAHLAAQFFAPVPETLVAVTGTNGKTSTVELTRQLW
RMAGHRAASIGTLGVTTSDESISTGLTTPDIATFLANLSGLAREGVTHVAYEASSHGLSQ
FRIEGPRVLAGAFTNLSRDHLDYHETMDAYFAAKMRLFDEVVVDGGTAVVWADDAWSDKA
ITHAKARGLKLFTVGEKGADIRLLGRTPTGLGQKLEIQHAGQKRVIDLPLIGAYQAANVL
VSVGLVLATGGDANATFDAVKRLVTVRGRIERAGVTASGAPVYVDYAHTPDALEAAIAAL
RPHVAGRLIVVFGAGGDRDQGKRPEMGRAASEGADLAIVTDDNPRGEDPAAIRAMVLAGM
AGKGREPAREVGDRREAIGAAIAEAGVGDIVLIAGKGHEQGQIIGSGDTMRVLPFDDVTV
AREMAGSLGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttccgccatctgctccgccgccgggctccctccggtggcgacggacgcgaac
gtcaccggcttcgcgatcgacaaccgcaaggtcgcgccgggcaccgtcttcggcgctttc
cggggcacgaagttcaacggcgaggacttcatcgccgccgccgtcgaggccggggcggtg
gcggtcgtcgcccatccggacgcgcatgtcgaaggcgtgatccacttcgccgacgaggag
ccgcggcggctgttcgcgcaccttgccgcgcagttcttcgctccggtgcccgaaacgctg
gtggccgttaccggcaccaacggcaagacctccaccgtcgagctgacccggcagttgtgg
cgcatggccgggcatcgcgccgcctcgatcggcacgctgggcgtcaccaccagcgacgag
agcatttcgacggggctcaccacgcccgacatcgcgaccttcctcgccaacctctcgggc
ctcgcgcgcgaaggcgtcacgcacgtcgcctacgaggcgtcgagccacggcctgtcgcag
ttccgtatcgaagggccgcgcgtgctcgccggagccttcaccaacctgagccgcgaccac
ctcgactatcacgagacgatggacgcgtatttcgccgcgaagatgcgtctgttcgacgaa
gtcgtggttgacggcggcacggcggtcgtctgggccgacgacgcgtggtcggacaaggcg
atcacgcatgcgaaggcgcgcgggttgaagctgttcacggtcggcgagaagggcgcggac
atccgtctgctcggccgcactcccaccgggctcgggcagaagctggagatccagcacgcc
gggcagaagcgggtcatcgacctgccgctgatcggggcctaccaggccgccaacgtgctc
gtctcggtcgggctggtgctggcgacgggcggcgatgcgaacgcgacgttcgatgcggtc
aaacgcctcgtgacggtgcgcgggcggatagagcgggccggggtcaccgcatcgggcgcg
ccggtctacgtcgactacgcgcatacgcccgatgccctggaagcggccatcgcggcgctg
cgtccgcatgtcgcggggcggctgatcgtggtcttcggtgccggtggcgaccgggaccag
ggcaagcggccggaaatgggccgggcggcgagcgagggggcagacctcgccatcgtcacc
gacgacaatccgcgcggggaagatcccgccgccatccgcgccatggttctggcgggaatg
gcgggcaagggcagggagcccgcgcgggaagtgggcgacaggcgggaggccatcggcgcc
gccatcgccgaagcgggcgtgggggacatcgtcctcatcgccggcaaggggcatgaacag
gggcagatcatcggcagcggcgacaccatgcgcgtcctgccattcgacgatgtcaccgtg
gccagggaaatggctggctcgctgggaaggtag
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