Novosphingobium sp. BL-52-GroH: ACFFDA_27235
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Entry
ACFFDA_27235 CDS
T11269
Name
(GenBank) RimK family alpha-L-glutamate ligase
KO
K14940
gamma-F420-2:alpha-L-glutamate ligase [EC:
6.3.2.32
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00680
Methane metabolism
novb01100
Metabolic pathways
novb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
ACFFDA_27235
Enzymes [BR:
novb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.32 coenzyme gamma-F420-2:alpha-L-glutamate ligase
ACFFDA_27235
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Motif
Pfam:
RimK
GSH-S_ATP
Rimk_N
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
Synapsin_C
LysX_preATP_grasp
CPSase_L_D2
DUF6356
Motif
Other DBs
NCBI-ProteinID:
XKH13152
LinkDB
All DBs
Position
1:3028578..3029948
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AA seq
456 aa
AA seq
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MRGWILFQHELDPAIPEVPEVFRFQEAAGAMGIELHVFRPHQFELVVGTGSDWAMKYQGQ
SVQRPDFVICRTGAETDYFTLALLRHFERRGVRLVNSPATIEMVSDKLHTLQTLNRAGLP
IPRTILGTFPVDVDLVERELGFPVIVKTLKGTRGAGVLKCEDRSQFEDLAGLLESAEAKA
DFILQHYVRASHGRDVRVLVVGGRVVAAMERRSLTGGFKSNVSLGGVGVAYNPPQEMAEL
AVQAADVLELDITGIDILFDEDGYRICEANSAPGFQGLERATGMDVPTAILEWVVATQDA
ARERTPLPAESTALSDMVFGGRAGLRSITDRNTEFRRFASAVGLRMVAAGLGALAQASFP
RMLVDRRSPVGVGLRSLFEGRVASELTGLDDRAQERTLMVVLAVAIWAAVLPWLAGAEPV
VSGALSFFALSFPVLFLLTAPAGRFGKSRLRKGGGA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcggctggattctctttcagcatgaactcgacccggcaatcccggaagtgcccgag
gtcttccgcttccaggaggcggcgggcgcgatgggtatcgagctgcacgtcttccgcccc
caccagttcgagctggtcgtgggcaccggcagcgactgggcgatgaagtaccagggccag
agcgtgcagcggcccgacttcgtgatctgccgcaccggcgccgagaccgactactttacg
ctcgccctgctgcgccacttcgagcgccgcggcgtgcgtctggtcaacagtccggcgacg
atcgagatggtgtccgacaagctgcacaccctccagaccctcaaccgcgcgggcctgccg
attccgcgcacgatcctgggcacgttcccggtcgacgtcgacctcgtcgagcgcgagctg
ggcttcccggtgatcgtcaagacgctcaagggcacgcgcggtgccggtgtcctcaagtgc
gaggaccgcagtcagttcgaggatcttgcagggctgctcgaaagcgccgaggcgaaggcc
gacttcatcctccagcactatgtgcgcgccagccacgggcgcgacgtgcgcgtgctggtg
gtcggcgggcgggtggtcgcggcgatggagcggcgctcgctgaccggcgggttcaagtcc
aatgtctcgctgggcggcgtcggcgtggcctacaacccgccgcaggagatggccgagctg
gcagtgcaggccgccgacgtgctggaactcgacatcaccggcatcgacatcctcttcgac
gaggacggctaccgcatctgcgaggccaactccgcccccggcttccaggggctggagcgc
gccacgggcatggacgtgccgaccgcgatcctcgaatgggtggtcgcgacgcaggacgcc
gcgcgcgagcggacgccgctcccggccgagagcactgcgctgtccgacatggtcttcggc
ggacgcgccggccttcgctcgatcaccgaccgcaacaccgaattccgccgcttcgccagc
gccgtgggcctgcgcatggtcgccgccgggctcggggcactggcccaggcctcgtttccc
cgcatgctggtcgatcgccgcagtccggtgggcgtgggcctgcgcagcctgttcgaaggc
cgcgtcgcttccgagctgaccggcctcgacgaccgcgcgcaggagcgcacgctcatggtc
gtcctcgccgtggcgatctgggcggcggtgctgccctggctggcaggggccgagccggtg
gtgagcggggcgctttcgttcttcgcgctcagtttcccggtgctgttcctgctcaccgcg
ccggcgggtcgttttggcaagtcgcggcttcgcaagggaggcggggcatga
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