Novosphingobium sp. ES2-1: IM701_01820
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Entry
IM701_01820 CDS
T10689
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo01501
beta-Lactam resistance
novo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IM701_01820
01503 Cationic antimicrobial peptide (CAMP) resistance
IM701_01820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
novo03036
]
IM701_01820
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novo02000
]
IM701_01820
01504 Antimicrobial resistance genes [BR:
novo01504
]
IM701_01820
Chromosome and associated proteins [BR:
novo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IM701_01820
Transporters [BR:
novo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IM701_01820
Antimicrobial resistance genes [BR:
novo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IM701_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
YknX_C
HH_EMRA
RibLong
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QOV94254
LinkDB
All DBs
Position
389380..390591
Genome browser
AA seq
403 aa
AA seq
DB search
MERSRFRERLSLSSTNRFVFALPTVVASALALSACGSADAQKEKPTPVVGVMVARAEPVE
LTTELSGRTEASEIAEVRPQVAGLVTARLFQEGSFVRAGQPLYQIDSRLYAASQAQASAS
LAAAQATVEANRLKAERFALLAQQGGVSKQEAADARAAYNQSRAAVGQARAALSSAQVNL
GFTRVTSPISGRIGISMVTKGALVTNAQAAPMAKVQRLDPMYVNIKQSGADFIALRRAIE
SGKLVAGAAPVTVILPDGSTYPVAGKLNPADIDVDPETGTITVRAVVPNPRGDLLPGLFV
RARVGQGTVPNGILVPQAAVSRDPRGRASVLVANAKDELEKRDVVADNPVGQNWLVTSGL
KPGDRVVVEGLINAREGQKVKVVPAGSKSKPEGAAGSGASGGN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaacgatcgagatttcgagagagactgtccttgtcgtcgaccaatcgctttgtattt
gccctgcctaccgttgttgcctcggcgctggcactctcggcttgcggctccgccgatgcc
cagaaggaaaagccaacgccggtcgtcggcgtcatggtggcaagagccgagccggtcgaa
ctcacgaccgaactatccgggcgtacggaagcatcggagattgccgaagtgcgaccgcag
gtggcggggctcgttaccgctcggctattccaggaaggctcgttcgtgcgggccggccag
ccgctctaccagatcgattcccggctctacgccgctagccaggctcaggcctcggcgtcg
cttgcggctgcgcaggctaccgtcgaggccaaccgcctcaaggccgaacgctttgcattg
cttgcccaacagggcggcgtaagcaagcaggaagcagcagacgcacgcgcagcctacaat
cagtcacgcgcggcagtggggcaggcgcgggcagcgctttcgtcggcacaggtcaatctt
ggcttcacccgcgtcacctcgccgatcagcggacgcatcggcatttcgatggtgacgaag
ggggctctggtgacgaacgcccaggctgcgcccatggccaaagtgcagcggctcgatccg
atgtacgtcaacatcaagcagtcgggggcagacttcatcgcgctgcgtcgcgcgatcgaa
agcggcaagctcgttgccggcgcggcccccgtgaccgtgatcctgcccgacggcagcacc
tatccggttgcgggcaagctcaatcccgccgacatcgacgtcgatcccgaaaccggtaca
atcaccgtgcgcgcggtcgtgcccaatcccagaggcgatctgctgcccggcctgttcgtc
cgggcccgcgtcggtcagggaacggtgccgaacggcatactcgtgccccaggccgccgtc
agtcgcgatccgcgtgggcgggccagtgtgcttgtcgcgaatgccaaggacgaactcgaa
aagcgcgacgtggtcgccgacaatccggtgggacagaactggctcgtcacatcaggactg
aagccaggcgacagggtagtcgtcgaggggctgatcaatgcgcgcgagggacagaaggtc
aaggtggttccggcgggttcgaagtcgaagcccgagggggcagcgggctctggcgcaagc
ggcgggaactga
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