Neofusicoccum parvum: UCRNP2_77
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Entry
UCRNP2_77 CDS
T03126
Name
(GenBank) putative u5 small nuclear ribonucleoprotein component protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
npa
Neofusicoccum parvum
Pathway
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_77
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npa03041
]
UCRNP2_77
Spliceosome [BR:
npa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
UCRNP2_77
Complex C
U5 SnRNP specific factors
UCRNP2_77
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
DUF5505
Motif
Other DBs
NCBI-ProteinID:
EOD53132
UniProt:
R1EZS8
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MDDLYDEFGNFIGEAESEEESDHGAAAADAYVYDEEPDDDEPANDQQLMELDDEGPSNAV
ILHEDKQYYPTAQQVYGADVETLVQEEDAQPLTQPIIEPVVQKKFNVEEADLPPVRFARD
FMTDLMNYPDQVRNVALAGHLHHGKTAFMDMLVLETHEIQERLDKRLGRSRDEQLRYTDT
HLLERERGVSIKAAPMSLVLQSSKGKSHLVNVMDTPGHVNFVDEVAASLRLADGVVLVVD
VVEGVQVNTEQIIKHAVLEGMALTLVVNKMDRLILELKLPPADAYFKLKHVVEEVNTVIE
NTIPGQGAKYRLSPEKGNVAFACSTMGWCFTLGSFTKMYADSYPGSGINAEDFSKRLWGD
IFFNPRSRKFTRKAVEEGAKRSFVHWVLEPIYKLYSHTLSESPEDLKETLGSLGIQLKPS
QYKTDAKQLLKLACEQFFGPASGFVDMITQHVPSPIEGANRYLERYYAGPTDTQTAESMK
KCDQDGPLIVHVTKLFNTTDARRFHSFGRVLSGIAKPGDQVRVLGEGYTIEDEEDMVLAT
ISDVWIGESRYNVPVSGIPAGNWVLLGGVDNSIVKTATIVPPKLPEDEDAYIFRPVKHFF
ESVLKVAVEPINPSELPKMLEGLRKINKSYPLITTKVEESGEHVVLGTGELYMDCVLHDL
RRLYAEMEIKVSDPVTRFCETVVETSAIKCYALTPNKKNKLTMVAEPLDPGIAEDIEAGK
VNIKDPVRVVGKFFEENYGYDLLASRNIWAFGPDDQGPNILQNDTLPSEVDQKLLRSVRD
TIRQGFSWATREGPLCEEPIRNTKFRVTDTSVLF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctatacgacgagtttggcaacttcatcggagaggccgagtctgaagaggaa
tccgaccatggcgcggcggcggcggacgcctacgtctacgatgaggagcccgacgacgac
gagcccgccaatgaccagcagctcatggagctcgacgacgaaggcccctcgaacgccgtc
atcctgcacgaggacaagcagtactacccgaccgcgcagcaagtctacggcgccgatgtc
gagacgctggtccaggaagaggatgcccagcccttgacccagcccatcatcgagcctgtc
gtgcaaaagaagttcaatgtcgaggaggccgacctaccgcccgtgcgctttgcccgcgac
ttcatgaccgatttgatgaactacccggaccaagtacggaatgtcgccctggccggacac
ttgcaccacggcaagactgctttcatggatatgttggttctggagacccacgagatccag
gaaaggcttgataagagactgggccggagtcgcgacgagcagctccgctacacggacaca
catttgttggagcgggaacgcggtgtctcgataaaggctgcaccgatgagtctggtgctg
caaagttccaagggcaagtcgcatctggtcaacgttatggatactcctggccacgtcaac
tttgtcgacgaagtcgccgcgtcgctcaggctggccgacggtgttgttctggtcgtggat
gtagtcgagggcgtgcaggtcaataccgagcagatcatcaagcacgccgtgctggagggg
atggcccttaccctggttgtcaacaaaatggaccgcttgatcctagagctaaagctgcct
ccggcagatgcctacttcaagctcaagcatgtggtcgaggaagtcaacaccgtcatagaa
aacaccatccctggacagggtgcaaagtaccgcttgagccccgagaagggcaatgttgcc
tttgcctgcagcaccatgggctggtgtttcacactgggatctttcaccaagatgtacgca
gacagctaccctggctccggtatcaacgcagaggacttcagcaagcgtctatggggtgat
atcttcttcaatcccagaagccgcaaatttacgaggaaggctgtggaggagggtgccaag
cgctcattcgtgcactgggttttggagcccatctacaagctgtactcccacacgctcagc
gaaagccccgaggatctgaaagagacattaggttctctcggaattcagctgaagccttct
cagtacaagactgatgctaaacagctattgaagcttgcttgcgaacagttcttcggcccg
gcgagcggcttcgtggacatgattactcagcacgttccatcacccatcgaaggagcgaac
cggtatctggaacggtactatgctggccccactgacactcaaacagcagagtccatgaag
aagtgtgaccaggacgggccgctcattgtgcatgtcaccaagcttttcaacactacagac
gctcggcgattccactcctttggacgtgttcttagcggcatcgcgaaacctggtgaccag
gttcgggtgcttggagaagggtacaccattgaagatgaggaagacatggtgctggcaaca
atcagcgacgtgtggattggcgagtcgaggtacaatgtcccggttagtggcattcctgct
ggaaattgggtgcttctcggtggtgtcgacaactccattgtaaagacggccacgattgtt
ccgcccaagcttccggaagacgaggacgcctacatcttcagaccagtaaagcacttcttc
gaatctgttctgaaggtggctgtagagccgatcaacccctcagagttgccaaagatgctc
gagggccttcggaaaatcaacaagagctatcctctgatcacgacaaaggtcgaggaatcc
ggagaacacgtcgttttgggaactggggagctttacatggactgcgtactccacgaccta
cgccgcttgtacgccgaaatggagatcaaggtgtccgaccctgtgactcgtttctgcgag
actgtcgtcgagacatctgccatcaaatgctacgctcttacccccaacaagaagaacaag
ctcactatggtcgcggaaccccttgatccgggtatcgcggaagacattgaggcgggcaag
gtcaacattaaggacccggtgcgtgtggttggaaaattcttcgaggagaactatggctac
gatttgctcgcatcacgcaacatctgggcatttggaccagatgaccagggccccaacatt
ctccagaacgatactcttccctcagaagttgaccagaagctgctgaggagcgtgcgcgac
accatccgtcaaggtttcagctgggctactcgtgaaggcccgctttgcgaggagcccatt
cgcaataccaagttccgcgtcacagacacgagcgtgctattctag
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