Nothoprocta perdicaria (Chilean tinamou): 112954304
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Entry
112954304 CDS
T07556
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04010
MAPK signaling pathway
npd04020
Calcium signaling pathway
npd04510
Focal adhesion
npd04540
Gap junction
npd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112954304 (PDGFRB)
04020 Calcium signaling pathway
112954304 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112954304 (PDGFRB)
04540 Gap junction
112954304 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112954304 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
npd01001
]
112954304 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
npd04090
]
112954304 (PDGFRB)
Enzymes [BR:
npd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112954304 (PDGFRB)
Protein kinases [BR:
npd01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
112954304 (PDGFRB)
CD molecules [BR:
npd04090
]
Proteins
112954304 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
112954304
NCBI-ProteinID:
XP_025903247
Ensembl:
ENSNPEG00000007004
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MPCPALKATLGLLFLAGLLEATSGGSRLHIEPREAEIVLSLHSTFSLVCYGDGMLVWERD
GQTLAASLEHKDGVFASNLTLRNVTGRQTGEYVCTYSPEHAPEPAERKAVYIYVPDPALV
FLPTAAEELFIFITGYTEAVIPCRVTNPQMQVILYEKKVENPILAAYDPQQGFKGFFEDK
TYFCRAIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENITLMCTVSGNELVNFN
WAYPREKAGKAVEPVTDFLPGSTHEIRSILIIQNAELDDSGTYICNVSEGYHEKTDRKDI
TIHVIERGFVRFHTHLASTEYAEVHKSRTIQVEVEAYPPPTITWLKNNKTLVMESNSEFT
ISSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDVQELSFHLQINVPAKVVDLKENS
SASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNDSAEIGLQTNATYHAE
LQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHTLPFKVVIISVILALLVLT
VISLVILIILWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRT
LGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIV
NLLGACTKGGPIYIITEYCRYGDLVDYLHHNKHTFLQSYGEKARREAELYGNTIKEDHVQ
SHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPER
TDRMTLINESPLLSYMDLIGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDF
GLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP
ELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVDC
YRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNARPAPSSPTSSILYTAVHQNGGENDYII
PLPDPKPEGICDLPLEASVSRASSMLNEVNTSSTISCDSPLGPQQDEEQESDPQLGCQEP
NTGHHEVEESFL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgccccgcgctgaaggccaccctcgggctcctcttcctcgccgggctgctggag
gcaacctctggaggcagcaggctgcacattgaacccagagaggccgagattgtccttagc
ctccacagcaccttctccctcgtgtgctatggggatggcatgctggtctgggaacgggac
ggtcagactctcgctgcctcgctggagcacaaggatggtgtcttcgccagcaacctcacc
ctcaggaacgtgaccggccgccaaacgggggagtacgtgtgcacctacagccctgagcac
gctccagagccagcggagaggaaggcggtttacatctacgttccagaccccgccctagtc
ttcctccccactgctgccgaagaactcttcatcttcatcactggttacacagaggctgtc
attccatgccgcgtgaccaacccacagatgcaggtcatcctctatgagaagaaggtggag
aaccccatcctagctgcttatgacccacagcagggcttcaaaggcttctttgaggacaag
acctacttctgccgggcaattgtggatgaccaggaggtggattcagatacattctacgtc
tacaggatccaagtttcctctgtgaatgtctccatcagtgctgtgcagacagtggtgagg
caaggagagaacattaccctgatgtgcacagtaagcggcaatgagttggtcaacttcaac
tgggcttatcctcgtgagaaggctgggaaggctgtggaaccagtgaccgactttctgcct
ggatccacccatgaaatccgttccatcctcatcatccagaatgcggagctagatgacagt
gggacctacatctgcaatgtctcagagggctaccatgagaaaacagaccgaaaagatatc
acaatccatgtgatcgagcggggctttgtgcgcttccacacccacctggctagcacggag
tatgctgaggtccataagagccgcaccatccaggtggaggtggaggcctacccaccgccc
accatcacatggctgaagaacaacaagactttggtcatggagagcaacagcgagttcacc
atctccagcaggaacctctcagaaaccaggtatcaaacagctctggttctggtgcgggtg
aagcaagaagaaggaggattttacaccatccgagcttccaatgaggatgatgtgcaggag
ctctccttccatctgcagataaatgtgccagccaaggtggtggatctcaaggagaacagc
agtgccagcagtggggagcagactgtaacgtgctctgctgaagggatgccgcagccagag
atcagctggtccacctgcagtgacattaaatggtgcagcaccaaggggcagcccacacgg
ctgctgggcaacgactcggccgagatcggcctgcagaccaacgccacgtaccacgcggag
ctgcaggtgtaccgcgtcaacagcaccctgcagctgcaccgcgtcgacgagcccctgctg
ctccggtgcaccgtgcagaacttcctgggcaccaactcgcaggacatcacgctggtcccg
cacaccttgccatttaaagtggtcatcatctccgtcatcctggccttgctggtccttact
gtcatctccttggtcatcctcatcatcctgtggcagaagaaaccacgttacgaaatccgt
tggaaggtgattgagtcagtcagctccgatgggcacgagtacatctacgtggatcctatg
cagctgccttatgactccagctgggaggtgcccagggacaagctggtgttaggtcgcact
cttggctctggtgcctttggacgtgtggtagaggcaacagcccatggcttgagccattcg
cagtccactatgaaagtggcagtcaaaatgctcaagtccactgccagaagcagcgagaag
caggccctcatgtctgagctgaagatcatgagccacctgggacctcacctgaacattgtc
aacttgctgggagcctgcaccaaaggagggcccatctacatcatcacggagtactgccgc
tacggggacctggtggactacctgcaccacaacaagcacaccttcctgcagtcctacggt
gagaaagcccggagagaggcggagctctacgggaacaccatcaaggaggaccacgtgcaa
agccatctttccttgtctgttgagagcgatggtggctacatggacatgagcaaggatgac
tccctggattatgtgcccatgtctgatatgaagggtgaagtcaagtatgctgacatcgaa
tcctccaactacggcactccatatgagctggacagctactccccatcagctcctgaaaga
acagaccggatgacactgataaacgagtctccacttctcagctatatggacttgattggg
tttagcttccaggtggccaatggaatggagttcctggcttccaaaaactgcgtgcatcgt
gacctggctgcaaggaacgtcctcatctgtgaggggaaactggtgaagatctgcgacttt
ggtctagcaagggacatcatgagggattcaaactacatctccaagggcagcaccttcttg
cctcttaagtggatggccccagagagcatcttcaacaacctctacaccactctgagcgat
gtgtggtcctttgggattctcctctgggagatattcactctgggaggaactccctaccct
gaactccctatgaatgaacagttctacaatgccatcaaacgtggctatcggatgtccaaa
cccacccatgcttctgacgaaatctatgatatcatgcagaagtgctgggaggagaaattt
gagataagaccatccttctcacagctggtggtgctcatgggaaacctcctggtggattgc
tacagaaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgctgtt
gttcgcacaagacccacgattcctgggctgaacaacgccaggcctgctcccagctccccc
accagcagcatcctctacacagctgtgcaccagaatgggggcgagaatgactatatcatc
ccccttcccgaccccaagcccgagggaatctgcgacctccctctggaggcctccgtcagt
cgggccagctctatgctgaacgaagtgaacacgtcatctacaatatcctgtgacagcccc
ctgggccctcagcaggacgaggagcaggaatcggacccgcagctgggctgccaggagccg
aacacgggacaccacgaggtggaggagagtttcctgtag
DBGET
integrated database retrieval system
