Nothoprocta perdicaria (Chilean tinamou): 112957975
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Entry
112957975 CDS
T07556
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04115
p53 signaling pathway
npd04145
Phagosome
npd04148
Efferocytosis
npd04350
TGF-beta signaling pathway
npd04510
Focal adhesion
npd04512
ECM-receptor interaction
npd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112957975 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112957975 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112957975 (THBS1)
04148 Efferocytosis
112957975 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
112957975 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
112957975 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112957975 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npd04131
]
112957975 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npd00536
]
112957975 (THBS1)
Membrane trafficking [BR:
npd04131
]
Endocytosis
Phagocytosis
Opsonins
112957975 (THBS1)
Glycosaminoglycan binding proteins [BR:
npd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112957975 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
112957975
NCBI-ProteinID:
XP_025907551
Ensembl:
ENSNPEG00000004892
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MGPALLFVLLALGGAEAKRAAESRGDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPESS
SPAYRIEDASRIPAVPDDKFQDLLDAIHAEKGFILLANLRQAKKSRGTLLAVEQKDGSGH
VFSLVSNGKAGTLDLSLTAEGGKQHIVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDLQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGVLHKNKEEWTIDSCTECTCQNSATICQKISCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGVITRIRLCNSPVPQLNGKPC
EGEARETKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE
AKGTQVCNKQDCPVDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE
VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNEMDNCQYVYNVDQRDTDLDGVGDQCD
NCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDISE
TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDTTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggggccggcgctgctcttcgtcctgctcgcgctgggcggcgcggaggccaagcgcgcc
gcagagtccaggggagacgataacagcgtgttcgatctctttgagctcatcggctttatt
cgcaagggagccgggcgccgggcacccggagtgcacctggtgaagggaccagagtcctcc
agccctgcttaccgcatcgaagatgccagtcgcatccctgctgtccccgacgacaagttc
caagacttgctagatgccatccacgctgagaagggcttcatcctcctggccaatctccgg
caagccaagaagagcaggggcacgctgctggctgtggaacagaaagatggctctggccac
gtcttcagtctagtatccaacggcaaggcaggcaccctggacctgagcctgactgctgag
ggtggcaagcagcatatcgtgtcagtagaggatgccttgctggctacaggacactggaag
aatatcaccctgtttgtgcaggaggatcgggctcagctctatgtggggtgtgagaagatg
gaaaatgcagaacttgacatccccatccagaacatcttcactagggatctggccagcagt
gccaggcttcgtattgccaaaggaggagtcaacgacaacttccagggactgctgcagaac
gtgcggtttgtgtttggaacaactctggaaaccatcctgaggaacaagggctgctccagc
tccacgagcgcgatcattacgttggacaaccccatcaatggttccagcccagctatccgc
actaattacatcggccataaaacgaaggacctccaagcagtctgtggcttttcctgtgat
gaactaacaaacatgttcgtggagctgcaagggctacgatccatggttacaacccttcag
gacagagtgcgcaaagtgactgaggaaaatgaactgattgctaaagtggtccagatcact
cctggagtctgcatccacaatggggtcttgcacaaaaataaggaagagtggactatcgac
agctgcactgaatgtacttgccagaactctgccactatttgccagaagatctcgtgccct
ctaatgccgtgttccaatgccaccgttcctgatggagagtgctgccctcggtgctggcct
agcgactatgctgatgatggctggtcgccttggtctgaatggacatcatgttccgtgacc
tgcgggaatgggattcagcagcgaggacgctcctgtgacagcctcaacaaccgctgcgag
ggctcctctgtgcaaacgcggacttgccaccttcaggagtgtgataagaggtttaaacag
gatggtggctggagccactggtcaccatggtcatcatgttctgtcacttgtggcacgggc
gtgatcacaagaattcgtctctgtaactctccagtaccacagctgaatgggaaaccttgt
gagggtgaagcaagagaaaccaaatcctgccagaaagatccttgcccaattaacggcaac
tggggcccatggtctccatgggatgcctgcacagtcacctgtggtggaggacttcaaaag
cgcagtcgtctctgcaataaccctgaacctcagtacgggggaaagacttgtgtaggtgaa
gctaaggggactcaggtctgcaacaaacaggactgcccagttgatgggtgcctgtctaat
ccctgctttgcgggaacaacgtgtaccagctcccctgatggctcctggaagtgtggcgcc
tgtcccgctggctaccatggggatggtgtccactgccaggacattgatgagtgcaaagag
gttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaacactgagcctggg
tacaactgcctgccttgccctccgcgtttcactgggacgcagcccttcggccgcagtgtt
gaggatgccatggctaacaagcaggtttgcaagccacgcaatccctgcacagatgggaca
cacgattgcaacaagaatgccaaatgcaactaccttggccacttcagcgacccaatgtat
cgctgcgaatgtaaacctggctatgctggcaatggcatcatatgtggagaagatactgac
ttggatggatggccaaacgagaaccttgtctgtgttgccaatgccacctaccactgcaaa
aaagacaactgccccaatctgccaaactctgggcaggaagactatgataaggatgggatt
ggtgatgcctgtgacaacgatgatgataatgatggtattcctgatgaccgggacaactgc
ccattcatctacaacccccagcagtatgactatgacagggatgatgttggtgaccgctgt
gataactgcccctacaatcacaaccccgaccagattgacactgacaacaatggagaagga
gatgcctgtgcagtggacattgatggagacggtgtccttaatgaaatggacaactgccag
tatgtctacaatgtagaccagagggatacagacttggatggagttggagatcagtgtgac
aactgcccactagaacacaatcctgaccaggaggatactgactctgaccgcataggtgat
gaatgtgacaacaaccaggacatagatgaagatggtcatcaaaataaccttgataactgc
ccctatgtgcccaatgctaatcaagctgaccatgacaaggatggaaaaggtgatgcctgt
gaccatgatgatgacaacgatggcatccctgatgacaaagataactgcagactggttgcc
aacccagatcaagctgattctgatggtgacggacgtggagatgcttgcaaagatgacttt
gaccaggatagtgtgccagacatcgatgatatctgccctgaaaatgtggacatcagtgag
actgatttccgacgatttcagatgattcccctggatcccaagggaacatcccaaaatgat
cccaactgggttgttcgtcaccagggcaaagaactggttcagacagtcaactgtgatcct
ggacttgcagtgggttttgatgaattcaatgctgtggacttcagtggcacatttttcatc
aacacagaaagagatgatgattatgctggctttgtatttggctaccaatctagcagtcgt
ttctacgtcgtcatgtggaagcagatcactcagtcttactgggacacgacgccaaccaaa
gctcagggctactcaggtctctccatcaaagtagtgaattccaccacaggtccaggggag
catcttcgtaatgctctgtggcacacaggaaacactcccgggcaggtgagaactttgtgg
catgaccctcgtcacataggctggaaagacttcacagcgtacagatggcgccttagccat
agaccaaagactggctacatcagggttgtaatgtatgaagggaagaaaatcatggcagac
tcgggaccaatctatgataaaacctatgccggtggtcggctaggattgtttgtcttctct
caagaaatggtgttcttctcagatctgaaatatgaatgcagagacccataa
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integrated database retrieval system
