Nothoprocta perdicaria (Chilean tinamou): 112958395
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Entry
112958395 CDS
T07556
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112958395 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npd03400
]
112958395 (TDG)
Enzymes [BR:
npd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
112958395 (TDG)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112958395 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
112958395
NCBI-ProteinID:
XP_025908004
Ensembl:
ENSNPEG00000015729
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MAAAHAPHTNRPRRPLASPPDISKLLMSCYFFFFAFLRYYSHLXQIQAFYTFPFHPMMTA
VPNMEVMTEQPTLEGIPEPNVAQEPTKAVAKGGRKRKTKAAEPKQPKKPAAKKEKATKSK
GKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGHHY
PGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEFREGG
RILVQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKKLEFGLQPHKVPDTETLCYVMPSS
SARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQEVQYTFDLQLAQEDAKKMAVKEE
KYDPGYEAAYGGAYCDHAIYENEQCNFSSNGTASNPQYCEGSSFGEVPNGQWMTQSFADQ
IPEFSAGMTQEQEGSSA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgcacgcgcctcacaccaaccgcccgcggcggccgttggcgtcaccgccg
gatatttctaaattgttgatgagttgttatttttttttctttgcctttctaaggtattac
tcgcatcttcakcaaattcaagctttttatacatttccgttccacccaatgatgactgca
gtgcccaacatggaagtgatgactgaacagccaactctagaaggcattccagaaccaaac
gtggctcaggaacctactaaagcagttgcaaaaggaggaaggaaaagaaaaacyaaagca
gctgagccaaagcaacccaaaaaacctgccgctaaaaaagaaaaagcaaccaaatcaaaa
gggaaacaggaaaagatcacagatacttttaaagtcaaaagaaaagtggaccgttttaat
ggtgtatctgaagcagagcttcttaccaagactttacctgatattttgacctttgatctg
gacattgtaataattggcataaaccctggcttgatggcagcttacaaaggacatcattat
cctggacctggaaaccatttttggaagtgtctcttcatgtctggtctaagtaatgaacag
ctgaaccatatggatgaccatactttaccacataaatatgggattggatttacaaacatg
gtggaaagaacaacacctggaagcaaagacctctccagcaaagagtttcgggaaggaggg
cgaattctggtgcagaaattgcaaaagtataaacctcgtatagcagcttttaatggaaaa
tgtatttatgaaattttcagtaaagaagtttttggaataaaagttaaaaaattggaattt
ggattgcagcctcacaaggtgccagatacagaaactctctgctatgttatgccatcatcc
agtgcaagatgtgctcagtttcctcgtgcacaagataaagttcattattatataaagctg
aaagacttaagggatcagctgaaaggcattgcaccaaacacagaggtgcaggaggtgcag
tacacgtttgacttgcaacttgcacaagaggatgctaaaaagatggccgtcaaagaagaa
aaatatgatccaggctacgaagcagcctatggaggagcttactgcgatcatgcaatatat
gaaaatgaacagtgcaatttttcttcaaatggaactgcaagcaatccacagtactgcgaa
ggatcctcctttggtgaagttcccaatggacagtggatgacacagtcatttgcagaccag
attccagaattcagtgctggaatgacacaggaacaagaaggaagcagtgcataa
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