Nothoprocta perdicaria (Chilean tinamou): 112958794
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Entry
112958794 CDS
T07556
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112958794 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
112958794 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112958794 (LSM3)
03041 Spliceosome [BR:
npd03041
]
112958794 (LSM3)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112958794 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
112958794 (LSM3)
Spliceosome [BR:
npd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112958794 (LSM3)
Complex C
U2 snRNP components
112958794 (LSM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
112958794
NCBI-ProteinID:
XP_025908508
Ensembl:
ENSNPEG00000005206
UniProt:
A0A8C6Z2C4
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADEVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggtggaccagcaacaaaccacaaataccgtagaggagcccctcgatctc
atcaggctcagtctagatgagcgaatctatgttaaaatgaggaatgacagagagctcaga
ggcagactgcatgcatatgatcagcatctaaatatgattttgggggacgtggaagaaact
gtaacaacaatagagattgatgaagaaacatatgaagagatttataaatctaccaaaagg
aatattccgatgctctttgtcagaggtgacggcgttgtgcttgtagctcccccattgagg
gttggctga
DBGET
integrated database retrieval system
