Nothoprocta perdicaria (Chilean tinamou): 112960276
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Entry
112960276 CDS
T07556
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03440
Homologous recombination
npd03460
Fanconi anemia pathway
npd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112960276 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
112960276 (BRCA1)
03460 Fanconi anemia pathway
112960276 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npd01009
]
112960276 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npd04121
]
112960276 (BRCA1)
03036 Chromosome and associated proteins [BR:
npd03036
]
112960276 (BRCA1)
03400 DNA repair and recombination proteins [BR:
npd03400
]
112960276 (BRCA1)
Enzymes [BR:
npd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112960276 (BRCA1)
Protein phosphatases and associated proteins [BR:
npd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112960276 (BRCA1)
Ubiquitin system [BR:
npd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112960276 (BRCA1)
Multi subunit type E3
BRCC complex
112960276 (BRCA1)
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112960276 (BRCA1)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112960276 (BRCA1)
BRCA1-A complex
112960276 (BRCA1)
BRCA1-B complex
112960276 (BRCA1)
BRCA1-C complex
112960276 (BRCA1)
BRCA complex
112960276 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
112960276 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
BRCT_2
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-RING_6
BRCT_3
zf-RING_10
zf-MIZ
TRAF3_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
112960276
NCBI-ProteinID:
XP_025910282
Ensembl:
ENSNPEG00000011945
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MDVSVGDVRSVLAAMQKNLECPICLDLIKEPVSTKCDHIFCRFCMLKLISRKKKGVIECP
LCKTEVTKRSLQENSRFKQLIEGLLETIHAFELDTGVKFLNSHHFSKASTEGNTAEALCK
ETSVIQSRGFRNRKKRAKENTQETFTLEANADPQLRDTRVKRHPLRNRNRECGSDTGIYI
EFGSDSSEELFKQASNTGRLGDKVLPISSQEKREELKSSEKTNEYSCKIQPIKLHAKEVI
LSDVIGESGFLKEGLSKKSTQNITEHAKPGQVNVTESQSSPLNVLAEDLFAEQCEKVGSP
LRKGDVSFFKSTEETAAEQAQYNSKSKESDLEDSSEIKLGKSKKIDIIEQCVEDVEMCEP
ESDCLPEESSLEKPEMPHSDTLNQVSRKRLKRSIQKVNEWFSKSNEILSSSSSQDDPAEA
TDTSAEGDACLSDKDSSISEKTSPMVNCVEIAFTEQNKKMSKPTADSLKDKIFGKTYKRE
RKSNHAIVFREILPIAKNEDVAADEKCLNNSRMEKLKCKRKTARVLQPEDFIKRKDVKEA
DGCPQNVNWCLDKAEKKKHDESSAVNESSVTEKREDNTLAGPGEEESIQKRATEEVTCES
NGVLEPKGYDQKSSKKPSSSAKKCRHSTRTMHALQLVVGRSSGSPDPAEPQIDSYPSSNE
PSKGDSEHRQVRRSRRLQLLAEEMTKDKGRRSSLTEGARRLDGGSGEPFSRVQRNVLVHS
SECKDSDEQQDTVCCRPAADLKSADLKADEIETXLKNSSDTADTGKSLFNPTSSCHHSNL
GSVVPDTDSQEGEMLSSPFPFQPPAVNAVQAASQVTKEKTTEVSATFPQKNRQCTDNVPE
VLRNENVLEVTKEAEDSELDTQYLRNIFRHSKRLSFTLHPSPLKAPTVDEASETLKTSRA
DQVENKHSKYLKTDNFQVEKITSKNVSRVYEEEKLKTCESVGLGPLSCFASNTECMHTGE
HAESVVHVVDQRNLTPPVRVGATSGENKNKQQKREPADNKTVSADTVVESELSQNPFKSN
RSQSDQSHTEEDAFQRXSPVNEIGFNSESNQAENTEVSGSHRPVLDFGPTSVVCPAEFNL
KGVEKKDSKRERKLSKSSEEQASQTASTGMPACLISDALEEPLKASTDFPSLSETPDGLL
CSDDDIQESNSFCETEKKERSAVFAKRSDSILAKQLDERSVSSTFLSQGMRRSRRRVRKL
QSSEEESSEDENLPCFQELIFGKSASTPLQLNKQVTPVVESSVSPSMLPHVESHQDPSMQ
KTPKAAQSAGCVSPSQESECSVNLFSSQSNVSEESGDGAQELKKSSTLVLGSKQMSNWND
SKETSQSCNGGLKKNNLNDECQEDANMGANLGEASGYDSETSHIEDSTGPFSQGEILTTQ
QKNAMQNNLEKLQQEMAVLEAVLKQHESRDSEFLPVRKELPHSSSEGALSTEQMRQGRGI
ESTSEVNLANKKCSSSKGFSTDFHVKSSHSSNSKTKELEERSPDLEGDFHCDSVVQNNVP
SQEKKTLPGAVKECDPRQAEPEKATDRKSGSKQNSPSVLSNPCGSVSRSPNSSSSSKRLL
RPRAPEAASSSALAQSANRSRTPGCKRDRGVGFPPSVLPNSSGKESATSPAGTNRREMSI
VASGLNQSEHLVVQKFARKTQSTLSNHMTEGTTHVIMKTDMELVCERTLKYFLGIAGRKW
VVSYQWVIQSFKEGRILDEGNFEVRGDVINGRNHQGPRRARQSLTEKIFKDFEICCYGPF
TDMTTEHLEWMVELCGASVVKELHLFTHKTNSTAVVVVQPDAWVENTDYEAIQQKNNVAV
VTREWVLDSVACYECQELDAYLVSQG
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgtccgtgggcgacgtgcggagygtccttgcggccatgcagaagaacctggag
tgccccatctgcttggatctgataaaggagccagtttccacaaaatgtgatcacatattc
tgcaggttctgcatgcttaaactcataagcagaaagaagaaaggtgtgatagagtgtccc
ctctgcaagactgaagttaccaaaagaagtcttcaggaaaattctagatttaagcagcta
atagaaggattgttggaaactatccatgcttttgaactggacacaggagtgaagtttctg
aacagtcatcacttttctaaagcatccacagaaggcaatactgctgaggccctgtgtaag
gaaacttctgtcattcaaagcaggggtttcagaaacaggaaaaaaagagctaaagaaaat
acacaagaaacttttaccttggaagctaatgcagatccacagcttagagacaccagggtc
aaaaggcatcccttgcgaaacagaaaccgggaatgtggctctgacacagggatctatata
gagtttggctctgattcatccgaagagcttttcaaacaggcaagcaatactggcaggtta
ggagacaaagtgcttccgatatcatctcaagaaaagcgagaagaacttaagagttctgag
aagacgaatgaatattcctgcaaaatacagcctatcaagctgcatgccaaagaagtaatt
ctgtcagatgtcataggtgaaagtggtttcttaaaggaaggtttgagcaagaaaagcact
cagaacattactgaacatgctaaacctggccaagtgaatgtgactgaaagccagagttct
cctttaaatgttcttgctgaagatttatttgcagagcagtgtgagaaagtgggtagccca
ctgaggaaaggggatgtgtctttctttaaaagcacagaagaaacggctgcagaacaagct
cagtacaatagtaaaagcaaagagtctgacttagaagatagctcagaaatcaagctgggt
aaaagcaagaaaatagatattattgagcaatgtgtggaagatgtggaaatgtgtgaacct
gaaagtgactgtcttcctgaagaatcttctctggagaagccagagatgcctcacagtgat
accctgaatcaggtttctaggaagagactaaagcgaagcattcagaaagtcaatgagtgg
ttttcaaaaagcaatgagatcctctcttccagttcttcgcaggatgatcctgctgaagca
actgacacttcagctgaaggagatgcttgtttgtcagataaagattcctctatttcggag
aagactagccctatggtaaattgtgtagaaattgcattcactgaacaaaacaagaaaatg
tcaaaaccaacagcagacagtctgaaagacaaaatatttggaaaaacatacaagagagag
aggaagtcaaatcacgctattgttttcagagagattttacctattgccaaaaatgaagat
gtggctgctgatgaaaaatgcttgaataattctagaatggagaagctaaaatgtaaaagg
aagactgcccgtgtcctgcaacctgaggacttcatcaagagaaaagatgtgaaagaggca
gatgggtgccctcaaaatgttaactggtgccttgacaaggctgaaaagaaaaaacatgat
gaaagttctgctgttaatgagagttctgtcactgagaaaagagaagataatacactggca
gggcccggagaagaagaatccatacagaaaagggctactgaagaagtgacttgtgaatct
aatggagtgctagaaccgaaaggctatgatcagaagagctccaaaaaaccaagttcttca
gcaaaaaaatgcaggcattcgactagaactatgcatgctctacagttagtcgttggtaga
agctcaggctcccctgatccagcagagccacagattgatagctatccaagcagcaacgag
ccaagcaaaggtgattctgagcacagacaggtcaggcgcagcaggaggcttcagttactt
gctgaagaaatgacaaaagataaaggaagaaggagtagtctaactgagggagcaaggagg
cttgatggtggaagtggggagcccttctccagggtgcaaaggaatgtgctggttcactct
tcggaatgcaaagactcrgatgagcagcaggatacagtgtgctgtagaccagctgctgat
ctgaagagtgctgatctgaaagctgatgaaatagagactrgtctaaagaattcatctgat
actgcagacaccggaaaaagtctcttcaatcctacatcttcatgtcatcattcaaatttg
ggttctgtggtacccgatacagactctcaggaaggtgaaatgctaagtagccctttcccc
tttcagcctcctgcagtgaatgctgtrcaagctgcttcccaggtgaccaaagaaaagaca
actgaagtaagtgctacttttcctcagaaaaacagacagtgtacagataacgtcccagag
gtcttgagaaacgaaaacgttttggaagtgaccaaggaagctgaagatagtgaattagat
acacagtatctgcgcaatatatttaggcattccaaacgactatcatttacccttcatcct
agtcccctgaaggcacccacagtagatgaggcttctgaaactttaaagacatcacgtgct
gatcaggtagaaaataagcatagcaaatatttaaaaactgataattttcaagtagagaaa
ataacttctaaaaatgtgagtagggtttatgaggaagaaaagcttaagacctgtgaatct
gttggtcttggtcctctctcttgctttgccagtaatactgaatgcatgcacactggggaa
catgcagaaagtgttgtacacgttgtggatcaaaggaatctgaccccaccagtaagggta
ggtgccactagtggtgagaataaaaacaaacagcaaaaaagagaacctgcagataataag
acagtgtcagcagatacagtggtagaaagcgagttaagtcagaatccgttcaaaagtaat
agaagccaaagtgatcagagtcatacagaagaggatgctttccagagaawaagcccagtt
aatgaaataggcttcaattcagaaagtaatcaggcagaaaacactgaagtttctggaagc
cacagaccagtattagactttgggcccacatcagtggtttgtcctgctgaatttaacctc
aaaggggtggaaaagaaagatagcaaaagagaaagaaaactatcaaagagcagtgaagaa
caggcatcccaaactgccagcacagggatgcccgcgtgtttaatttcagatgctctagaa
gagcctcttaaagctagtacagactttcccagcctgtctgaaacccctgatggattactt
tgctctgatgatgatattcaggagagcaacagcttttgtgaaactgagaagaaagagaga
tctgctgtgtttgccaaaagaagcgacagcatcctggcaaaacaactggatgaaagaagt
gtgagttctacctttctgtctcaaggtatgcggagatctcgaagaagagtgcggaagctg
cagtcttcagaggaagaatctagtgaggatgaaaatttgccatgttttcaggaattaata
tttggcaaatcagcaagcacgcctttgcagctcaataaacaggtgacacctgtggtcgag
tcctcagtaagtcccagcatgctgcctcacgtcgaaagtcatcaggaccctagtatgcag
aagacacccaaagctgcccaaagtgctgggtgtgtttctccaagccaggagtccgaatgt
tccgttaatttattttcttcccaatccaacgtgtctgaagagtcaggtgatggggcccaa
gaactgaagaaatcttcaacactagttcttggatccaaacaaatgagtaattggaatgac
agtaaagaaacttctcaaagttgtaatggagggctaaagaaaaataacctgaatgatgaa
tgccaagaagatgcaaacatgggagcaaacctaggtgaagcgtctggatatgacagtgaa
acaagtcacatagaagattcaaccggaccgttctctcagggtgaaatcctcactacacag
cagaagaatgctatgcaaaacaacctagaaaaacttcaacaagaaatggctgttcttgaa
gcagtgctgaagcagcatgaaagtcgagattcagagtttttacctgtccgtaaagaactg
cctcattccagtagtgaaggagcgctcagtactgagcagatgagacaaggaagaggaata
gagtcaacttcagaagtaaatttggcaaataagaaatgcagcagttcaaagggattttca
actgattttcatgttaagtcaagtcattcttccaacagtaaaaccaaagagctagaagaa
aggagcccggatctcgagggagactttcactgtgacagtgttgttcagaacaacgttcct
tctcaagagaagaaaaccctgccaggagcagtgaaagagtgtgatccacgtcaggctgaa
ccagaaaaagcaactgacaggaaatctgggagcaagcaaaacagcccatctgtcttatca
aatccctgtggaagtgtgagccgaagtccaaacagctcttcctcctccaaaaggcttctc
cgcccgcgagctccagaagcagcaagtagttctgctctagctcagagtgcgaatagaagc
cgcactccaggatgtaaacgggatagaggggtaggttttcctccctctgttctgcccaat
tcatctgggaaagaaagtgctacaagtccggctgggaccaaccggagagaaatgtcaatt
gtggcatcaggtctgaatcaaagtgaacatttggtggtccagaagtttgccagaaaaact
cagagcactttatctaatcacatgacagaaggaacaacccatgtcataatgaaaacagat
atggagctggtgtgtgaacggaccttgaagtattttctgggtattgcaggaagaaaatgg
gtcgttagttatcaatgggtaattcagtcttttaaagaaggaaggatacttgatgagggt
aactttgaagttagaggggatgtgatcaatgggagaaaccaccaaggcccaaggagggct
aggcagtctctgactgaaaagatctttaaagattttgagatctgctgctatggacctttc
actgatatgactacagaacatctggaatggatggtggagctctgtggtgcttccgtggtg
aaggaacttcatctgttcacacacaaaacaaattctaccgctgttgtggttgtgcaacca
gatgcttgggtggaaaacacagactacgaagcaattcagcaaaagaacaacgttgctgtg
gtgactcgagagtgggtattagacagcgttgcttgctatgagtgccaggagttagatgct
taccttgtgtctcaagggtga
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integrated database retrieval system
