Novosphingobium pentaromativorans: JI59_07035
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Entry
JI59_07035 CDS
T03399
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn01501
beta-Lactam resistance
npn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JI59_07035
01503 Cationic antimicrobial peptide (CAMP) resistance
JI59_07035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npn03036
]
JI59_07035
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npn02000
]
JI59_07035
01504 Antimicrobial resistance genes [BR:
npn01504
]
JI59_07035
Chromosome and associated proteins [BR:
npn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JI59_07035
Transporters [BR:
npn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JI59_07035
Antimicrobial resistance genes [BR:
npn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JI59_07035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
HH_MFP_RND
Beta-barrel_RND_2
HH_AAEA_pHBA
BSH_CzcB
BSH_CusB
YknX_C
RibLong
HH_EMRA
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
AIT79558
LinkDB
All DBs
Position
1463638..1464855
Genome browser
AA seq
405 aa
AA seq
DB search
MTLKNASSMVLALALLAGCSAAEQPKPQPPKVGVVKITEQSVELTTDLPGRVQAVETSEV
RPQINGVIRQRLFAEGSFVKAGQVLYEIEDAPYRAALGTAQGNLANAQATVRATQLQADR
YRELVDINAVSKQEFDNAVASAQQAKANVAAQKSAVDSARVNLGFTHIRAPISGRIGRSF
YTRGALVQTGQSDPLATIMRTDSVYVDVTQTAAQILDLKDALANGGLSRENRESARVKLI
LPNGKTYPIEGRLEFAEVAVDPDTGSVTIRATFPNPDGLLQPGMFVRAQLVEGIKQNAIL
APQQGISRDPRGRATALVVTNDNKVEMRQVEAVRPIGDKWLISDGLKPGDRLIVEGLTGI
QPGATVTPGVPQQVTASKASPVKTASATPSPARSTPASSAPAEKR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactcttaaaaacgcctcgtccatggtgcttgcactcgctctcctcgccggttgcagt
gctgccgaacagcccaagccccagccgccgaaagtcggcgtggtgaaaatcaccgaacag
tccgtcgagttgacaacggatctgcccggccgcgtgcaagccgttgaaacatctgaggtc
cgcccgcagatcaacggtgtgatccggcagcgcctgttcgccgagggcagtttcgtgaag
gcgggacaggtcctttatgagatcgaggacgcaccctatcgggccgctctgggcacggcg
cagggcaacctcgccaatgcccaggcgactgtccgcgcaacgcagttgcaggccgatcgc
taccgcgaactggtcgacatcaatgccgtcagcaagcaggaattcgacaatgccgttgcc
tccgcgcagcaggccaaggcgaatgttgcagcgcaaaagtcagccgtcgattcggcccgc
gtgaacctgggtttcacccacattcgcgccccgatatccggccgcatcggtcgctcgttc
tacacccgcggcgcgctcgtccagacaggtcagagcgatccgctggcaaccatcatgcga
accgacagcgtctatgtggacgtcacgcagaccgccgcgcagatcctcgacctcaaggac
gccctcgcgaatggcggcctttcgcgcgagaaccgcgagagcgcgcgcgtcaagctgatc
ctgcccaacggcaagacctatccgatcgagggtcgactggaattcgccgaagtcgccgtc
gatcccgacaccggcagcgtcaccattcgcgccaccttccccaatcccgacggcctgctg
cagccgggcatgttcgtgcgggcccaactcgtggaggggatcaagcagaacgcgatcctc
gctccccagcagggcataagccgagacccgcgcgggcgcgccaccgctctggtggtcacc
aacgacaacaaggtggagatgcgccaggtcgaggcagttcgcccgatcggcgacaagtgg
ctcatcagcgacggcctcaagccgggcgaccggctgatcgtcgaaggcctcaccggcatc
cagccgggagccacggtcacgcccggcgtaccgcagcaggtgaccgccagcaaggcttcc
cccgtcaagaccgcatccgccaccccctcaccggcaagatccacgccggccagttccgct
ccggccgaaaagcgctga
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