Nyctereutes procyonoides (raccoon dog): 129493540
Help
Entry
129493540 CDS
T09008
Name
(RefSeq) LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03018
RNA degradation
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129493540
09123 Folding, sorting and degradation
03018 RNA degradation
129493540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129493540
03041 Spliceosome [BR:
npo03041
]
129493540
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129493540
mRNA degradation factors
5'-3' decay
Lsm complex
129493540
Spliceosome [BR:
npo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129493540
Complex C
U2 snRNP components
129493540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
129493540
NCBI-ProteinID:
XP_055155800
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADAVDQQQTINTVEEPLDLIRLSLDEXIYVXMRNDXELRGRLHAYDQHLNMILEDVEET
VTTIEIDEETYEEIHKSTKWNIPMLFVWGDGRVLVASPLRVR
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagtggaccagcaacaaactatcaacactgtagaagagcccctggatctc
atcaggcttagcctggatgagtgaatttatgtgnaaatgagaaatgactgagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattggaagatgtggaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatacataaatcaacaaaatgg
aatattccgatgctttttgtctggggagatggtagggtactagttgcttctccattaaga
gttcgctga
DBGET
integrated database retrieval system
