Nyctereutes procyonoides (raccoon dog): 129504368
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Entry
129504368 CDS
T09008
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04360
Axon guidance
npo05017
Spinocerebellar ataxia
npo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
129504368 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
129504368 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
129504368 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npo04040
]
129504368 (TRPC3)
Ion channels [BR:
npo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129504368 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
129504368
NCBI-ProteinID:
XP_055172997
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MSTKGRKCKEQARVTFPAPEEEEEEEEEEEEEEEEGEDRGSEPQRRRRGWRGVNGGLGPR
SAPSQREPHGYRPPPFSPGLAPSMEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLT
AEEERFLDAAEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKE
NLARIGDALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRF
SPDITPIILAAHCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINA
YKGLASPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLC
RDSEEVEAILNGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYEN
LSGLREQTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFL
GLLVFNASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELW
LEGPREYILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPP
EIQYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDI
FKFMVLFIMVFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLK
YDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYF
DDGKTLPPPFSLVPSPKSFVYFVMRIINFSKCRRSRLQKDIEMGMGNSKSRLNLFTQSNS
RVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYE
LLEDKSQATEELAVLIHKLSEKLNPSMPRCE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaagggcaggaagtgcaaggagcaggcgagggtgaccttccccgcgccggag
gaggaggaggaggaggaggaggaggaggaagaggaggaggaggaaggcgaggaccgaggc
tcggagccgcagcgccgccggcggggctggaggggcgtcaacggggggctggggccgcgc
tcggcgccctcgcagcgggaaccgcacggctaccgcccgccgcccttctcgcccgggctg
gccccgtccatggagggaagcccatccctgaggcgcaagacggtgatgcgggagaagggc
cggcgccaggccgtccggggcccggctttcatgttcaatgaccggggcactagcctcacg
gccgaggaggagcgcttccttgacgccgcagagtatgggaacatccctgtggtgcgcaag
atgctggaggagtccaagacgctgaacgtcaactgcgtggactacatgggccagaacgcg
ctgcagctggccgtgggcaacgagcacctggaggtgaccgagctgctgctcaagaaggag
aacctggcgcggatcggcgacgccctgctgctggccatcagcaagggctacgtgcgcatc
gtggaagccatcctcaaccaccccggcttcgcggccagcaagcgcctgaccctgagcccc
tgtgagcaggagctgcaggacgacgacttctacgcctacgacgaggacggcacgcgcttc
tcgcccgacatcactcccatcatcctggcggcgcactgccagaagtacgaggtggtacac
atgctgctgatgaagggcgcccgcatcgagcggccgcacgactatttctgcaagtgcgga
gactgcatggagaagcagaggcacgactctttcagccactcccgctccaggatcaatgcc
tacaaggggctggccagcccggcctacctgtccttgtccagcgaggaccccgtgctcacc
gccctggagctcagcaacgagctggccaagctggccaacatagagaaggagttcaagaat
gactatcggaagctctccatgcaatgcaaagactttgtagtgggtgtgttggatctttgc
cgagattcagaagaagtagaagctattctgaatggagatttggaatccgcagagcctcta
gaggtacacaggcataaagcttcactgagtcgtgtcaaactcgctattaagtatgaagta
aaaaagtttgtggctcaccccaactgccagcagcagctcctgacaatctggtatgagaac
ctctcaggcctacgggaacagaccatagctatcaagtgtctggttgtgctggttgtggcc
ttgggccttccatttcttgccatcggctactggatcgcaccttgcagcaggctggggaaa
attctgcgaagcccttttatgaagtttgtggcacatgctgcttctttcatcatattcctg
ggcctgcttgtattcaatgcctcagacagatttgaaggcatcaccacgctgccaaatatc
actgttattgactatcccaagcagatcttcagggtgaaaaccacccagttcacgtggact
gagatgctaattatggtctgggttcttgggatgatgtggtctgagtgtaaggagctctgg
ctggaaggacctagggaatatattttgcagttgtggaatgtactggactttgggatgctc
tccatcttcattgctgctttcacggccagattcctagctttccttcaggcgacaaaagca
cagcagtatgtggacagttatgtccaagagagtgacctcagtgaagttacacttccacca
gaaatccagtacttcacttatgccagagataaatggctcccttctgaccctcagatcata
tctgaaggcctctatgctatagctgttgtgctcagcttctctcggatcgcatatatcctt
cctgcaaatgagagctttggtcccttgcagatttctcttggaaggactgtgaaggacatt
ttcaagttcatggtcctctttattatggtgtttcttgcctttatgattggcatgttcata
ctgtattcttactatcttggagctaaagtaaatgctgcttttaccactgtagaagaaagt
ttcaagactttgttttggtcgatatttgggttatctgaagtcacttccgttgtgctcaaa
tacgatcacaaattcatagaaaatattggatatgttctttacggaatatacaatgtaact
atggtggtcgttttactcaacatgttaattgccatgattaatagctcatatcaagaaatt
gaggatgacagtgatgtagaatggaagtttgcccgttcaaaactttggttatcttatttt
gatgatggaaaaacattacctccacccttcagtctagttcctagtccgaagtcatttgtt
tatttcgtcatgcgaatcattaacttctccaaatgcaggaggagccggctgcagaaggat
atagaaatgggaatgggtaactccaagtccaggttaaacctcttcactcagtctaactca
agagtttttgaatcacacagttttaacagcattctcaaccagccaacacgttatcagcag
ataatgaaaagacttataaaacgatatgttctgaaagcacaagtagacaaagaaaatgat
gaagttaatgaaggtgaattgaaagaaatcaagcaagatatctccagccttcgttatgaa
cttttggaagacaagagccaagcaactgaggaattagctgttctgattcataaactcagt
gagaaactgaatcctagcatgccaagatgtgaatga
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