Novosphingobium sp. PP1Y: PP1Y_AT17267
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Entry
PP1Y_AT17267 CDS
T01515
Name
(GenBank) 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00020
Citrate cycle (TCA cycle)
npp00310
Lysine degradation
npp00380
Tryptophan metabolism
npp00785
Lipoic acid metabolism
npp01100
Metabolic pathways
npp01110
Biosynthesis of secondary metabolites
npp01120
Microbial metabolism in diverse environments
npp01200
Carbon metabolism
npp01210
2-Oxocarboxylic acid metabolism
Module
npp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
npp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PP1Y_AT17267
09105 Amino acid metabolism
00310 Lysine degradation
PP1Y_AT17267
00380 Tryptophan metabolism
PP1Y_AT17267
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PP1Y_AT17267
Enzymes [BR:
npp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
PP1Y_AT17267
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Gene cluster
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
RnfC_N
GCV_H
Motif
Other DBs
NCBI-ProteinID:
CCA92611
UniProt:
F6IMF9
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All DBs
Position
complement(1820873..1822102)
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AA seq
409 aa
AA seq
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MSTEVKVPTLGESVSEATIGQWLKQPGEAVAADEPIASLETDKVAIDVMAPHAGVMGQQL
AGEGDTVTVGALIATIEEGSGSAPAPKKEAAAKSDAPAPAAAAPAAAPAAAEDAPSGASV
LSPAVRRAVLEYGIDPSTIKGTGKDGRITKDDVIAAAKNKPASAPASAAPAASAAPARKE
ERVKMTRLRQTIAKRLKSAQDNAALLTTFNDVDMSAVMEAREKYKDVFAKKHGIKLGFMS
FFAKASVLALKDIPAVNAQIDGDEIVYHDYVDISIAVSAPNGLVVPVVRDCDKLGFAGIE
QAIADYGKRAKEGTLTMEDMKGGTFTISNGGVFGGLMSTPIINPPQSAVLGLHRIEDRPV
VRNGEIVIRPMMYIALSYDHRIIDGREAVTALKTIKEAIEDPTRLLIDL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaagtcaaggtccccacgctcggcgaatccgtttccgaggccaccatcggc
cagtggctgaagcagcccggcgaggcggttgccgctgacgagccgattgccagcctcgag
accgacaaggtcgccatcgacgtcatggccccgcacgcgggtgtcatgggccagcagctc
gcaggcgaaggcgacaccgtcaccgtcggtgcgctgatcgccaccatcgaggaaggttcg
ggctcggccccggctcccaagaaggaagccgccgcgaagagcgacgctccggcccctgcc
gctgctgcgcccgccgccgccccggccgctgccgaagacgcaccctcgggcgcctcggtc
ctctcgccggcagtgcgccgcgcggtgctggaatacggcatcgatccctcgaccatcaag
ggcaccggcaaggacgggcgcatcaccaaggacgacgtgatcgcggccgccaagaacaag
ccggcttccgcgcctgcctcggccgctccggccgcatccgccgcgcccgcgcgcaaggaa
gagcgcgtcaagatgacgcgcctgcgccagacgatcgccaagcgcctcaagagcgcgcag
gacaatgccgccctgctcaccaccttcaacgacgtcgacatgtcggcggtcatggaagcg
cgtgagaagtacaaggacgtcttcgccaagaagcacggcatcaagctcggcttcatgtcc
ttcttcgccaaggcctcggtccttgcgctcaaggacatcccggcggtcaacgcccagatc
gacggcgacgagatcgtctatcacgactacgtcgacatctcgatcgcggtctcggccccg
aacggcctcgtcgtcccggtcgtgcgcgactgcgacaagctgggcttcgccggcatcgag
caggccatcgccgactacggcaagcgcgccaaggaaggcacgctgaccatggaagacatg
aagggcggtaccttcacgatttccaacggcggcgtgttcggcggcctgatgtcgaccccg
atcatcaacccgccgcagtcggcggtgctgggcctccaccgcatcgaggaccgaccggtc
gtgcgcaatggcgaaatcgtcatccgtccgatgatgtacatcgcgctgtcctacgaccac
cgcatcatcgacggtcgcgaggcggtcaccgcgctcaagaccatcaaggaagcgatcgag
gatcccacgcgtctcctgatcgacctttga
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