Novosphingobium sp. PP1Y: PP1Y_AT32722
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Entry
PP1Y_AT32722 CDS
T01515
Name
(GenBank) 4-hydroxy-2-ketovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00362
Benzoate degradation
npp00621
Dioxin degradation
npp00622
Xylene degradation
npp00984
Steroid degradation
npp01100
Metabolic pathways
npp01120
Microbial metabolism in diverse environments
npp01220
Degradation of aromatic compounds
Module
npp_M00569
Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PP1Y_AT32722
00622 Xylene degradation
PP1Y_AT32722
00621 Dioxin degradation
PP1Y_AT32722
00984 Steroid degradation
PP1Y_AT32722
Enzymes [BR:
npp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
PP1Y_AT32722
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
PP1Y_AT32722
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
Motif
Other DBs
NCBI-ProteinID:
CCA94007
UniProt:
F6IHX6
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Position
complement(3432776..3433819)
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AA seq
347 aa
AA seq
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MTDKVQVSGRPIKLHDMCLRDGMHSMRHQITISQMIDIATGLDAAGVPLLQVTHGDGLGG
SSLNYGRGLHSDSEYITAVASRMKNAVVSVLHVPGIGTLDELRMAADCGAGCVHVASHCT
EADVTEQHIGLGRKLGLDTVGFLMMAHMTTVETMVEQALLMEGYGATTVYCTDSAGYMLP
EEVTERIAALRAGLQPETEIGFHGHHNLGMGVANSLAAVAAGANRIDGSAAGLGAGAGNT
PLELFAAVGERMGIITGVDVFGLMDVAQDRVLPIMPQPPRADRDAITLGYAGVYSTFLYL
AKDCAAKYGVPARDILMELAAKKMIGGQEDMIEDTALTMARERGLAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaagtccaagtcagcggccgcccgattaaactgcatgacatgtgtctgcgc
gatggcatgcattcgatgcggcaccagatcacaatttcgcagatgatcgatattgcgact
ggcctcgacgccgccggcgtgccgttactgcaggtcacccacggcgatggtctgggcggt
tcctcgctcaattacggtcgcggtctgcacagcgacagcgaatatattaccgcagtcgcg
tctcgtatgaagaatgccgtcgtctcggtgcttcacgtgcccggcatcggcacgctcgac
gaattgcgcatggccgccgattgcggcgccggctgtgtccacgtggcctcgcactgtacg
gaagccgacgtgaccgaacaacatatcggacttggccgcaagctgggccttgatactgtc
gggttcctgatgatggcgcatatgaccacggttgaaactatggtcgagcaagcgctgctg
atggagggctatggtgcgaccaccgtttactgcacggacagtgcgggctacatgctgccg
gaggaagtgaccgagcggatcgctgcccttcgcgccgggctacagccggaaaccgagatc
ggtttccacggtcaccacaacctcggcatgggggttgccaattcgctcgcggcggtggcg
gcgggggccaaccggatcgatggttccgcggcagggcttggtgccggggccggcaatacc
ccgctggaactgttcgctgccgtcggggaacgcatgggtatcatcaccggtgtcgatgtg
ttcggtctgatggatgtggcgcaggaccgggtgctgccgatcatgccccagccgccgcgg
gccgatcgcgatgcgattactctgggttatgccggcgtctattcgacgttcctttacctc
gcgaaggactgcgctgccaagtacggcgtgcctgcccgtgacatcctgatggaactcgcc
gcgaaaaagatgatcggtggtcaggaggacatgatcgaggataccgcgttgaccatggcg
cgcgaacggggactggcggcttag
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