Novosphingobium sp. PP1Y: PP1Y_AT9347
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Entry
PP1Y_AT9347 CDS
T01515
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp01501
beta-Lactam resistance
npp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PP1Y_AT9347
01503 Cationic antimicrobial peptide (CAMP) resistance
PP1Y_AT9347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT9347
01504 Antimicrobial resistance genes [BR:
npp01504
]
PP1Y_AT9347
Transporters [BR:
npp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PP1Y_AT9347
Antimicrobial resistance genes [BR:
npp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PP1Y_AT9347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
CCA91874
UniProt:
F6IK56
LinkDB
All DBs
Position
complement(1001487..1004642)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSRYFIDRPIFAWVIAIVVMLAGIIALRVLPVAQFPTIAAPAVTVSTTYPGADAQTLENT
TTQVIEQQMKGIDNLRYFSSTSDSAGNLAITLTFDQGTDPDTAQVQVQNKLAQATPLLPE
DVQRSGVRVARAAKDFLIVMALYSDDGSHDQVDIGDLISSKLQDPVSRVDGVGDTQLLGA
PYAMRIWLDPYKMANLKVTVSDITAAVKAQNAQISAGQVGSLPAPEGQALNATVTAQSRL
QTPEQFGNILLRTDSDGANVRLSDVARVEIGADNYSFLARFKGKQAAALAIKLAPGANAL
DTVEGVKAAVAEVSKQFPADIRIEYPVDNSTFIELSISQVEHTLIEAIILVFVVMFLFLQ
NWRATLIPTIAVPVVLLGTFAILLAAGFTINTLTLFGMVLAIGLLVDDAIVVVENVERLI
QTEGLSPKEAARKSMDEISGALVGVGLVLSAVFLPMAFFGGSTGVIFRQFSITIVSSMVL
SVLVALILTPALCATILKPSREDHGERGGFFGWFNRTFDRGVERYSNGLRRVERNWKRSL
AVYAMIVVGMGVLFWRLPGGFLPDEDQGFLFAQAMMPSGTTMEETQRTVDRMTDYLLNEE
KDVVDSMLSIGGFGFAGQSQNVAIAFIKLRPWEEREGEGMGVTALAERANVAFHKLGVGQ
IFAFAPPAVTELGNATGFDFELKDEANLGHEALIAARNQLLGMAAQDKRLAMVRPNGIED
TTQLKLDVDKEAAGAFGLSIPDINTTLSTGFGGSYVDDFVDRGRVKRVYVQADSEFRTTP
ESLGNLFVRGSGGEMAPLASFSSTEWGYGPARLERYNGVSSVEILGSAGPGYSTGEAMQA
MEELAAKLPPGIGYEWTGISYEEKLSGSQAPMLYALSLLVVFLCLAALYESWSVPIAVIL
VVPLGVVGALLAATFVGLANGIYLQVGLITTIGVSAKNAILIVEFAEEKMRDGLSAAEAA
LQAAKLRLRPILMTSFAFIFGVLPLAVSSGAGAGGQNAIGWSVVGGMLSATVLAVFLVPL
FFFVVKRIFRQDQPNREAHAATTDDAPLEQD
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctatttcatcgacagacccatcttcgcctgggtcatcgccattgtcgtcatg
ctcgcgggcatcatcgccctgcgggttctgccggtcgcccagttcccgaccatcgccgcg
ccggcggtgacggtcagcacgacgtatcccggcgccgatgcccagacgctcgagaacacc
accacgcaggtgatcgagcagcagatgaagggcatcgacaacctgcgctacttctcgtcg
acgagcgattcggcgggcaacctcgcgatcacgctgaccttcgaccagggcaccgacccc
gataccgcgcaagtccaggtccagaacaagctggcacaggccacacccctgctgcccgag
gacgtccagcgttcaggcgtgcgcgtggcgcgcgctgccaaggacttcctcatcgtcatg
gcgctctattccgatgacggatcgcacgaccaggtcgacatcggggatctcatctcctcg
aagctgcaggacccggtgagccgtgtcgacggcgtcggcgatacccagttgctcggcgct
ccctatgccatgcgcatctggctcgatccgtacaagatggccaacctcaaggtgacggtc
tcggacatcactgccgcggtcaaggcgcagaacgcccagatttccgccggccaggtcggc
agcctccctgcacccgaaggacaggcgctcaacgcaacggttaccgcgcagtcgcgcctg
caaacccccgaacagttcggcaatatcctgctgcgcaccgacagcgacggcgccaacgtg
cgcctttccgacgtcgcccgcgtcgagatcggcgccgacaactacagcttccttgcccgc
ttcaagggcaagcaggccgctgcgctggcgatcaagctcgcccccggcgcaaatgcgctc
gacactgtcgaaggcgtgaaggcggcggtcgcagaagtttccaagcagttcccggccgac
atccgcatcgagtacccggtcgacaactcgaccttcatcgagctttccatcagccaggtc
gaacacacactgatcgaggcgatcatcctcgtcttcgtggtgatgttcctgttcctgcag
aactggcgtgcgacgctcatcccgacgatcgcggtcccggtcgtgctgctgggcaccttt
gccatccttctggctgccggcttcaccatcaacaccctgaccctgttcggcatggtgttg
gcgatcggcctgctggtcgacgacgccatcgtcgtggtcgaaaacgtggaacgcctgatc
cagaccgaggggctcagtccgaaggaagccgcgcgcaaatcgatggacgagatcagcggc
gcgctggtcggtgtcggcctcgtgctgtcggcggtgttcctgccgatggcattcttcggc
ggctccaccggcgtcatcttccgccagttctccatcaccatcgtttcctccatggtgctc
tcggttctggtcgcgctgatcctgaccccggccctgtgcgcgacgatcctcaagccctcg
cgcgaggaccatggcgaacgcggcggcttcttcggttggttcaaccgcacgttcgaccgc
ggcgtcgagcgctacagcaacggcctgcgccgggtggaacgcaactggaagcgctcactg
gccgtctacgcgatgatcgtcgtgggcatgggcgtgctgttctggcgcctccccggcggc
ttcctgcccgatgaagaccagggcttccttttcgctcaggcaatgatgccctcgggcacg
accatggaagaaacccagcgcaccgtggaccgcatgaccgactacctgctcaacgaagag
aaggacgtggtcgattcgatgctcagcatcggcggcttcggctttgccggacagagccag
aacgtggcgatcgccttcatcaagctgcgcccttgggaagaacgtgagggcgagggcatg
ggcgtcaccgcgctggccgagcgtgccaacgttgccttccacaagctcggcgtcggccag
atcttcgcgttcgccccgccggcagtgacggagctgggcaatgccacaggcttcgacttc
gaactcaaggacgaggccaacctcggccacgaggcgctgattgccgcgcgcaaccaactg
ctcggcatggccgcgcaggacaagcgcctcgcaatggtgcgccccaatggcatcgaggac
actacccagctcaagctcgacgtggacaaggaagccgcgggcgccttcggcctttcgatc
ccggacatcaacacgacactcagcaccggcttcggcggcagctacgtcgacgacttcgtc
gaccgtggccgcgtcaagcgcgtctacgtgcaggccgactccgaattccgcacgacgccc
gaatcgctcggcaatctcttcgtacgcggcagcggcggcgagatggccccgctggcatcc
ttctcctcaaccgagtggggctacggtccggctcgcctcgagcgctacaacggcgtctcc
tcggtcgagatactcggttccgccggccccggctacagcaccggcgaagcgatgcaggcg
atggaagagctggcagcgaagcttccgcccggcatcggctacgaatggaccggcatctcc
tatgaggaaaagctgtcgggcagccaggccccgatgctctacgcgctttcgctgctggtc
gtgttcctgtgccttgctgcgctctacgagagctggtcggtgccgatcgcagtcatcctc
gtggtgccgctgggcgtcgtgggcgccttgcttgccgcgaccttcgtgggccttgccaac
ggcatctacctgcaggtgggcctgatcacgacgattggcgtctcggccaagaacgccatc
ctcatcgtcgaattcgccgaggaaaagatgcgcgatggcctcagcgccgccgaagccgcg
ctgcaggccgccaagctgcgcctgcgcccgatcctcatgacctcgttcgcattcatcttc
ggcgtgctgccgctcgcggtttccagcggagcgggcgccggcggacagaatgccatcggc
tggtcggtcgtgggcggcatgctatcggcgacggtcctggcggtcttcctcgtgccgctg
ttcttcttcgtcgttaagcggatcttccgccaggaccagccgaaccgcgaagcgcacgcc
gctaccaccgacgatgcacctctcgagcaggattga
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