KEGG   Novosphingobium sp. PP1Y: PP1Y_Spl287
Entry
PP1Y_Spl287       CDS       T01515                                 
Name
(GenBank) type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:npp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP1Y_Spl287
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_Spl287
Enzymes [BR:npp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PP1Y_Spl287
Secretion system [BR:npp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PP1Y_Spl287
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: CCA89784
UniProt: F6IBV9
LinkDB
Position
Spl:complement(27905..29638)
AA seq 577 aa
MKVPGALWSMKSMPIVWQPFLLGFAISFALCLVGVFASMFSAQKLHGEARWARFGEVKDA
GLLASAGIILGRFNARFLRFGGTEHVMLEAPTRAGKGVGVVIPNLLSWPDSVVVLDVKQE
NWDLTSGYRAKELRQKTLLFNPLDGEGRTCRYNPLGHIDRRDPVEIINELQKIGAMLFPL
PLTGDNFWAESARTAFLGVSAYVAATVDDGEDALPFTIGEVYRQFAAGDARRRFPKIIKQ
REQAGKPLSGACISALRDWISSSDNTFTSIRQSVTAKINLWLNPYVDAATAESDFDLRQF
RDKRISLYLGVSPDDLERVAPIYNLLFQQLIDLNVRELPSSDRHNVRLLLLLDEFTRLGR
ASVIASGFSYVAGYGIRLLPVIQNFSQLDHIYGDKVAKEISANCGVQIVMRPKEINDAKN
VSERLGTYTFRAKSRSFGAWGRGGGSVSESDQRRALLLPQELLLLPEKDLIVLRSGIPPV
YGRKIRYYQEKDMLALTKVPAPAMPTIRPDPSVPARSLRVITAAEASGESDAVIPGASAR
PLNMPVVKALQATANHAPRQTAHMLFKDLFSVMIPTA
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgaaagtgccgggcgcgctctggtcgatgaaatccatgccgatcgtctggcaaccgttt
cttctgggcttcgcgatcagctttgccttgtgcctggtcggcgtcttcgcctcgatgttc
tcggctcaaaagctgcacggcgaggcacgctgggcgcgctttggcgaggtgaaggatgct
gggcttctcgcaagcgccggcatcatccttggccgtttcaatgccaggtttctgcgcttc
ggcgggaccgagcatgtcatgctcgaagccccaacccgggccggcaagggcgtgggcgtc
gtgatcccgaacctgctgtcctggcccgattccgtcgtggtcctcgatgtgaagcaggag
aactgggacctgacctcaggctaccgcgccaaggagcttcgccagaagacgctcctgttc
aacccgctcgacggggaaggaaggacatgccgctacaatccgctcggccatatcgaccgc
cgcgatcccgtcgaaatcatcaacgagttgcagaagatcggagccatgctgttcccgctc
cccctgaccggcgacaatttttgggccgaaagcgcgcgcacggcctttctcggcgtctca
gcttatgtcgcggccacggtcgatgatggcgaggacgccctgcccttcacgatcggcgag
gtctaccgccagttcgccgctggcgatgccaggcgccgcttcccgaagatcatcaagcag
cgcgaacaggccggaaagcctctctcgggcgcgtgcatttctgcgctgcgcgactggatt
tcttcgtcggacaacaccttcacgtccattcgccagtccgtgacggccaagatcaacctt
tggctcaacccttatgtcgacgcggcaacggccgagagcgacttcgatctgcgccagttt
cgcgacaagcggatctcgctctacctcggcgtttcgcccgacgacctcgagcgggtcgcg
ccgatctacaacctgctcttccaacagctcatcgacctcaacgtgcgcgagctgccctca
tccgaccggcacaacgtgcgcctactcctcctgctcgacgagttcacccgcctcggccgg
gcctcggttatcgccagcggcttcagctatgtggcgggctacggcatccgcctcctcccc
gtgatccagaacttctcccagctcgatcacatctacggcgataaggtggccaaggagatc
tccgcgaactgcggcgtgcagatcgtcatgcgacccaaggagatcaacgacgccaagaac
gtctcggagcgcctgggcacctacacctttcgcgccaaatcccgttcgttcggcgcctgg
ggccgcggcggcggttcggtgtcagaatccgatcagcgccgtgcgctcctgctcccgcaa
gagcttctcttgctgcccgaaaaggacctgatcgtcctgcgctcgggcatcccgcccgtc
tacggcaggaagatccggtactatcaggagaaggacatgctcgcgctgacgaaggtgccg
gctccggcgatgccgacgatccggcccgacccttccgttccggcgcgaagccttcgcgtc
atcacggctgcggaggcgagtggggaaagcgacgcggtaatacccggagccagcgccagg
cctctaaacatgccggtggtcaaagcgcttcaggcgacagccaatcacgccccccggcag
acggcgcacatgttgttcaaggacctattttccgtgatgatcccaacagcctga

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