Nanorana parkeri (Xizang Plateau frog): 108785726
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Entry
108785726 CDS
T04897
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npr04515
]
108785726
Cell adhesion molecules [BR:
npr04515
]
Cadherins
Protocadherins
108785726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
108785726
NCBI-ProteinID:
XP_018410361
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MDIRDCCLCWKWQVAFSLFLCSWGWVSGQLHYSIVEEADPGTWVGNVAQGLGIKGAEISQ
RRLHLSSEKYQKYFAVNKENGGLTVNARIDRDFLCGSSVNCVLHLEVVAEIPLELFGLDI
EIQDINDNSPIFLSSKRIIEITELLNPGARFTLDIAKDLDVGVNGISQYILNTNPYFSLS
VKNRKDGTLIPQLILEKVLDREEKHEHNLILTAVDGGEPTRSGSCHITIIVLDFNDNPPV
FDQPVYKIKLKENVPLNTVIITLNATDYDEGANGEILYYIDDHTAESIREKFSLNEQSGQ
IYINGSIDYEEVHFYEFSITAVDKGFPKLEGDCVVHIEVEDVNDNYPEISFSSMTNQIAE
NVPFGTAVGFINIEDRDSGKNGEIQFELSPNTPFKIRTIKNRYSLVTDGILDRENISQYT
IELTASDLGSPAQSSKAIVILSVSDVNDNAPIFTQSTYNAFIKENSDPGTFLCTVSATDA
DEGENSDLVYSIVETQIDGSSVSSFVYINSKNGDIHAQRSFDYEHIQTLQITIKVEDSGS
PKLFSTVPVFIFILDTNDNSPTLLYPEHSEDLIVQEKIPKSTSAGYLVTKLTAVDPDCGH
NAWLTFNLYDPGSSALFQVSKHTGEVRTVHGFQDIENTENQLIISISDHGDPPLSTTVTV
LVIIADEVIVEKPKSGDLFTHNKAPSDITLYLIVSLVAISLVSLVTFIILLVRCLRKESY
GYSSSCCYLSGPESKSYMDQYQPALFLNTDGTLKYMEVRMVPPGAQGQCYQTNVPPAPQQ
RDSAFLQSLHFPQLRELVKDSDTSSDTSCLNDPAKMLKTGATGLLAECMKATGRLHYATQ
RTAKLDKHNPNRMRASTQNRLRHCLGEQETHIN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagagactgttgtctgtgttggaaatggcaagtagctttctcccttttcctt
tgtagctggggctgggtctctgggcagcttcattattctattgtggaggaggctgatcca
gggacatgggtaggaaatgtagctcagggtctgggcattaagggtgcagagatttctcag
cggagattacatttatcatctgagaaataccaaaaatattttgctgtaaataaggaaaat
ggaggcttgactgttaatgccagaattgatagagatttcctgtgtggatccagtgtgaac
tgtgtgctgcatttagaggtggttgctgaaattcctttagagctttttggtttagatata
gagattcaggatatcaatgataattctcccatatttttatctagtaagcgcatcattgag
attactgaattattaaatcctggtgcaaggtttaccttagatattgctaaggatctagat
gttggtgttaatggtattagtcagtacatattaaacacaaatccttatttctctttgtct
gtaaagaatcgtaaggatggaactctcatccctcaactgatattagagaaggtgttagat
agggaggagaaacatgaacacaatcttattctcactgctgttgatggtggagaacctaca
agatcaggatcctgtcatatcactataatagtgctagattttaatgataatccaccggtc
tttgatcaaccagtgtataaaataaagcttaaggaaaatgttcctttaaatacagttata
ataactttaaatgcaacagattatgatgagggagcaaatggtgaaatcctgtattatatt
gatgatcacacagcagaatccattagagaaaaattttctttgaacgaacaaagtggtcag
atttatattaatggctctatagattatgaggaagtccatttttatgaattttctattaca
gcagtagacaaaggatttcctaaactggaaggtgactgtgtcgttcatatagaagtagaa
gatgttaatgacaattatcctgaaatttctttttcttcaatgacaaatcagattgcagaa
aatgtgccttttgggactgctgttggtttcattaatatagaagacagggactcagggaaa
aatggagagatacaatttgaactatcccccaatactccttttaaaatcagaactattaaa
aaccgttattcactggtcactgatgggattttggatagagaaaatatatcccaatacact
attgagctgacagcttctgatttagggtctcctgctcagtctagtaaggcgattgttatt
ctcagtgtttctgatgttaatgataatgcaccaatatttacacaatctacctacaatgct
ttcattaaggagaacagtgacccggggacctttctgtgtacagtgtctgctactgatgca
gatgagggggaaaactctgatctggtttactccatagtggagacccagatagatggatca
tctgtatcctcatttgtttatattaattccaaaaatggtgatatacatgctcagcgttct
tttgactatgagcacattcagactctacaaatcactataaaagtagaggattctggatct
ccaaaattattttctacagtccctgtctttatattcatattggatacaaatgacaactcc
cccaccctgctgtatccagagcactctgaggacctcattgtccaagagaaaatcccaaaa
tctacaagtgcgggatacctggtgacaaaactgactgcagtggatccggactgtggtcac
aatgcttggttgacttttaacctctatgatcctggcagttctgcacttttccaagtgtct
aaacatacaggagaggtcaggactgtgcacggatttcaggatatagaaaatacagagaat
caacttatcatctctatcagtgatcatggagaccctccattatctactactgtcactgta
cttgttattatagcagatgaggttatagtagaaaaaccaaaatctggtgatttattcacc
cacaataaagcaccatcagatattactttatatttaattgtttctcttgtggctattagt
ttagtttcccttgtgacattcattatattactagtgagatgtctgaggaaagaaagttat
ggttatagcagcagttgctgttatcttagtgggcctgagtccaaatcatacatggatcag
tatcagccggctcttttcctgaacacagatggaacattaaaatacatggaagtcaggatg
gtacccccaggagcacaaggacaatgttaccaaacgaatgttcccccagccccacaacag
cgggattcagcttttctgcagtctctacattttcctcaattaagggaactagttaaagac
agtgatacctcttcagatacaagttgtctgaatgatccagccaagatgctgaaaacagga
gcaactggtcttcttgctgaatgtatgaaggcaacaggacgactccactacgcaactcaa
aggactgctaagctggataaacacaatccaaacagaatgagagccagtacacagaacaga
ctgcgccattgcctcggtgaacaggaaacacatataaactga
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