Nanorana parkeri (Xizang Plateau frog): 108787821 Help Entry 108787821         CDS       T04897                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism npr  Nanorana parkeri (Xizang Plateau frog) Pathway npr04010   MAPK signaling pathway npr04120   Ubiquitin mediated proteolysis npr04140   Autophagy - animal npr04144   Endocytosis npr04620   Toll-like receptor signaling pathway npr04621   NOD-like receptor signaling pathway npr04622   RIG-I-like receptor signaling pathway npr05132   Salmonella infection npr05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:npr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108787821 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     108787821 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     108787821 (TRAF6)    04140 Autophagy - animal     108787821 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     108787821 (TRAF6)    04621 NOD-like receptor signaling pathway     108787821 (TRAF6)    04622 RIG-I-like receptor signaling pathway     108787821 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     108787821 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     108787821 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:npr04131]     108787821 (TRAF6)    04121 Ubiquitin system [BR:npr04121]     108787821 (TRAF6) Enzymes [BR:npr01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108787821 (TRAF6) Membrane trafficking [BR:npr04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     108787821 (TRAF6) Ubiquitin system [BR:npr04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108787821 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 TRAF3_RING zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 U-box DUF4455 zf-TRAF_2 SAM_KSR1_N SlyX TRAF6_Z2 zf-RING_11 zf-RING_6 Sina_ZnF Spc29 Med21 Seryl_tRNA_N DUF16 TMF_DNA_bd Cortex-I_coil ADIP TFIIF_alpha Motif Other DBs NCBI-GeneID:  108787821 NCBI-ProteinID:  XP_018412970 LinkDB All DBs Position Unknown AA seq 555 aa AA seqDB search MSLVNSRTSFEVSDDACCAAMAACCMNTKDDVTSPSVETPGGNSSSLVMEETQGYDVEFD PQLESKYECPICLMALREPLQTPCGHRFCKACILKSLRDAGPKCPVDNDLLLENQLFPDN FAKREILSLMVKCPSECCSAKMELRHLEHHKAICEYTSVECRHCQGLFQRKQLEQHEVVE CPRREVSCENCLVSMPYEQALDHEQTCPLAYVTCEYCETSGLVRNQMAFHYNMDCIKAPI PCIYSQFGCNEKMQRDDLARHQQEFTQAHMRMMAQSLLSFSTSLTPTSHMPSITLDPTQF QPGPPSVFTLPSRLVSGHDTNQDSQQLKETVEQLEARLVKQDHQIRELMAKMETQCAYVT DLKQTIRTLEDKLVEVEAQQYNGIFVWKIHHFSAHLKNQEEEKPVVIHSPGFYTGKPGYK LCLRLHLQLPNAPRCANYISLFVHTMQGEYDGLLHWPFQGTIRLSILDQSEGSCMQDQEE VMDTKPDLLAFQRPTMPRNPKGFGYVTFMHLQALRQRMYIKNDTLLVRCVVTTHVDLNSP RREGFQPRNTDGTTM NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgagtctagtcaactccaggaccagcttcgaggtctcggacgacgcctgctgtgcagct atggctgcttgctgcatgaacaccaaggatgacgtcaccagcccatccgtggagaccccc ggtgggaactcttccagcctggtcatggaggagacgcaaggctacgatgtggagtttgac ccccagctagagagcaaatacgagtgtcccatctgcctcatggcactgcgggaaccactg caaacaccgtgcggacaccgcttctgtaaggcctgcatcctaaagtctttaagagacgcc gggccgaagtgcccagtggacaacgaccttctcttggagaaccagctgttcccggataac tttgccaaacgagagatcctttcccttatggtgaagtgtcccagcgaatgctgctcggcc aagatggagctgaggcacctggagcatcacaaggctatctgtgagtataccagcgtggaa tgccgacactgccagggactcttccagagaaagcaactggagcagcacgaggtggtggag tgtccgaggcgagaggtgtcctgcgaaaactgtcttgtgtctatgccctatgagcaggcg ctggatcatgagcagacgtgccctttggcctacgtaacttgtgaatattgtgagaccagc ggccttgtgcgaaatcagatggcctttcactataacatggactgcataaaggcccccatt ccgtgtatctacagccagtttggatgtaatgaaaagatgcagagagatgatctcgctcgg caccagcaggagtttacacaggctcacatgcggatgatggcacagtctcttctgagcttc agcacctccctcacccctaccagccacatgcccagcataacgcttgaccccacccagttt cagcctgggcccccttctgtattcacgttaccctctcgtctggtgtcggggcatgacacc aaccaagacagtcagcagctgaaggagaccgttgaacaactggaggcccgtctggtgaag caagaccaccagatccgagagctaatggccaaaatggaaacccagtgtgcctacgtaacc gatctaaagcaaacaatccgtaccttggaggacaagcttgtggaggtggaggctcagcag tacaatggtatcttcgtgtggaagattcatcattttagtgcccacctaaaaaaccaggag gaggagaaaccagtggttatacacagtccaggattttacacgggaaaaccaggttacaag ctctgtctgcgtcttcacctgcagctccccaacgctcctcgctgtgccaactatatctcc ctctttgtacacacaatgcagggagagtacgacggcctcctccactggccttttcaggga accatccgcctctccatcctggaccaatcagaagggtcctgtatgcaagaccaggaggag gtaatggacaccaaaccagacttgctggccttccagaggcctacaatgcctcgaaacccc aaaggctttggttatgtcacatttatgcaccttcaggcgctcaggcagcggatgtacatt aaaaacgacacacttttagtgcgctgcgtcgtaactacacacgtggacctcaacagcccg cgacgggaaggattccagccacgcaacaccgatggcacaacaatgtag

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