Nanorana parkeri (Xizang Plateau frog): 108789810
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Entry
108789810 CDS
T04897
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr00310
Lysine degradation
npr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108789810 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108789810 (SETDB1)
Enzymes [BR:
npr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
108789810 (SETDB1)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108789810 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108789810 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
BAHCC1-like_Tudor
DUF4537
DUF489
ODAD1_CC
Motif
Other DBs
NCBI-GeneID:
108789810
NCBI-ProteinID:
XP_018415412
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MDESDVSDLENMVVEELGISMKELEEFIDKEVEKNEFVKQRKAQLLELEQLVKQKEEEVA
HVDSLCDNASRALEDCEMLVKTLYSEMGITYKETSSDDDESSKPVEVIEIPDEDEDDDDV
VSVGSGEAVVSKVPKEKRLLKDAMAAMKRCQKDVQNLVEAIHKKPVIVLDGPQTRLSSHP
SSPSSSVGGPNQTSTANDMKKDGDLVVGMRILGKKRTKTWHKGTLISIQMVGAGKKYKVK
FDNKGKSLLSGNHIAYDYHPPLDKLFVGSRVVARYKDGNQVWLYAGIIAEPPSNKNKMRF
LIFFDDGYASYVTHSELYPICRPLIKTWEDIEDVSCRDFIEEYVTAYPNRPMVLLKSGQL
IKTEWEGTWWKSKVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQ
AGQQRTRPNVGAVRSKGPVVQYTHDLTGSESPYKTTEPSSPQSIPSPQLIDTDSDSQQAQ
SKKQVAKKSTSFRPGSGGSGPSSPVPSEPPPTVRPVQQNQTNQMQIQTVHTIQAIQTIPT
IHAIQTNQTIQIAQSQRFVANVAQIQVLQTNALPTEITYKAPTEKLFYLRHNCSHACLSR
VRNISHRIRNPLLVPLLYDFRRMTARRRVNRKLGFHVLYKTPCGLSLRTMPEIERYLFET
TCDMLLLEMFCLDPYVLVDRKFQPQKPFYYIPDITYGKEDVPLSCVNEIDRTPPPQVAYS
KERIPGRGVYINTGQDFLVGCDCTDGCRDRSKCACHQLTLEATGCTPGAQINTQAGYQHK
RLEECLPTGVYECNKRCKCNHNRNLCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKG
SFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENYKDGYESDVKSSSDSSGVDIK
HQGEEHSGTEDQDESQDDSSDDNFGKNEDITTSSVWRSYATRRQTRGQKENGTVDTSSKD
SALARQTSQEETTDCKLPEETSKNKVASWLSSNTDSFLDPDSRSSLKLGDAADIEKQGKK
EEPAKDTEDSKPAGESNRSYGYNPTPAKPEGIKRPLSKTAMHQIRRQSNAHSNEDVLTLS
SSSGSDVGSGANKKPTTQTNANDSDDVQTISSGSDVDEDKKHITTTTGPVKRQVAVKSTR
GFALKSTYGMTVKPNMASADRGEGMIGRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSC
SPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKKLLCCCGSTEC
RGRLL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcagatgtgagcgatctggagaacatggtggtggaggagttgggaatctct
atgaaggagctcgaggagttcatagacaaggaggtggagaagaatgagtttgtgaagcag
cggaaggcacagttgttggagctggagcaactggtgaagcagaaggaggaagaggtggcc
catgtggacagcttgtgtgacaatgcttcaagggctctcgaggactgcgaaatgttagtg
aaaacgttgtacagtgagatgggcatcacatacaaggagaccagctcagatgatgatgaa
tcctccaaacctgtggaagtcattgaaatcccagatgaggatgaggacgatgatgatgtc
gtgagtgtgggatcaggtgaagcagttgttagtaaagttcctaaagagaaacgactgtta
aaagacgctatggctgccatgaagaggtgccagaaagatgtacagaacttggtggaggcc
attcacaagaagcctgtcattgttttagatggaccccaaactcgcctgtcctctcatcct
tcttcgccttcaagttctgtgggtggtcccaaccagacctccacagccaatgacatgaaa
aaggatggagaccttgttgtgggtatgaggattcttggtaagaagaggaccaaaacatgg
cacaaggggaccctgatttccattcagatggttggagcaggaaaaaaatacaaagtcaaa
tttgacaacaaagggaagagcctgctgtccggcaaccatatagcgtatgattaccaccca
ccactagataaactgtttgttgggagcagagtggtggccagatacaaagatggcaaccag
gtatggctctacgctggcatcatagctgaacctcccagcaacaagaataaaatgagattt
ctgatcttcttcgatgacggctatgcttcctatgttacacactcagaactataccccatt
tgcaggccattgatcaaaacctgggaagatattgaagacgtgtcctgccgtgacttcatc
gaagaatatgtcactgcgtaccctaaccgacctatggttctgctgaaaagcggccagctg
ataaaaacagagtgggagggcacctggtggaagtctaaagtggaagaggttgatggaagc
ctggtgaagattttattcttggatgacaagcgttgtgagtggatctatcgaggctccacc
cgcctggagcccatgttcagcatgaagacctccacagcttccactcaagaaaaaaagcag
gcaggacagcagcgaacacgtcctaatgtgggtgcggtgcggagtaaaggacctgtggta
cagtacacacacgatcttactgggagtgaatctccttataaaactacagagccaagctca
ccccagtcgatcccatcaccacaacttatcgacacagactctgacagccagcaggctcag
tccaagaagcaagttgcaaagaaaagtacatcgttccggccaggatctggaggctccggg
ccatcgtctcctgtacccagtgagccgcctcccactgtgcggcctgtccaacagaatcag
accaaccaaatgcagattcaaactgttcacaccatccaagctatacagactattccaaca
atacatgccattcagactaaccagacgattcaaatcgcacagtctcaaagatttgtggcc
aacgtggcacagattcaagtccttcagacaaatgcattgccgacggagatcacttataag
gctcccacggagaagctgttttacctacgccacaactgtagccacgcatgcttatcccgt
gtccgtaacatatcacatcggatcaggaaccctctgctggtgccactgctgtatgacttc
cgccgtatgaccgcacggcggcgggttaaccgcaagctgggattccacgtcctctacaaa
acgccgtgcggcctcagcctgcgaaccatgcctgagatcgagcgttaccttttcgaaaca
acctgtgacatgctgctgttggaaatgttctgcttggacccctatgttctggtggaccgc
aagttccagccgcagaaacctttctactatatccccgatatcacatacggaaaggaggat
gtgccgctctcctgcgtcaatgagatagacaggacccctcctccacaggtggcatatagt
aaggagcgcattcccggcagaggagtatatattaacacgggccaggactttctggtggga
tgcgactgcacggatggatgccgagacaggtcaaaatgtgcctgtcaccaactgacgttg
gaggccactggctgcacgccgggagcgcagattaacacacaagctggataccaacacaag
cgtctggaggagtgtcttcctacgggggtgtatgaatgcaacaagagatgtaaatgcaat
cacaatcgaaatctatgcacaaaccgcttggttcagcatggcctccaagtgcgtctccag
cttttcaaaacgcaaaacaaaggttggggtattcgttgtctggatgacattgcaaaaggg
tctttcgtctgtatatatgcaggtaaaatcctgacagatgactttgcagacaaggaaggg
ttggagatgggagatgaatactttgcaaatttggaccacatcgagagtgtagaaaactac
aaggacggttacgaaagtgatgtcaagtcgtcttcggatagcagcggcgtagacatcaag
catcagggggaagaacacagcggcacagaagatcaggacgagtcccaagacgacagttcg
gacgacaattttggaaagaacgaggacatcacaaccagctctgtatggcggagctatgct
acacggcggcaaactaggggacagaaagagaacgggactgtagacacctcctctaaggac
tctgctctagccagacagaccagccaagaggagaccacagactgcaaactgcccgaggag
acctccaagaacaaggttgcttcttggttgagctctaacacggactcatttttggaccct
gatagccggtcgtctctcaaattgggggatgcagcagatatagagaagcaggggaagaag
gaggaacctgccaaggatactgaagacagcaagcctgctggggagagcaatcgatcgtat
ggttataatccaacgccagctaagcctgagggcatcaaaaggccactgagcaaaaccgcc
atgcaccagatcagacgccagtccaatgcccactctaatgaagatgtgctgaccttgtcc
agcagttcggggagtgatgtcggcagtggggcaaacaagaagcccaccacccagactaat
gccaatgacagcgacgatgtccaaaccatttcttctggttctgatgtagacgaggacaag
aagcacataaccactactaccggcccagtgaagagacaagtggctgtaaaatccacccgc
ggctttgccctaaaatccacctatggcatgacagtgaagcccaacatggcatctgcggac
agaggcgaaggaatgattggccggaggacaacgcggcaattttacgatggggaggagtct
tgttacattatcgacgccaaacttgagggaaatttgggtcgatacttgaatcacagctgc
agtcccaacctgtttgtacagaatgtgtttgtggacacacatgacctgcgatttccctgg
gtggctttcttcgccagcaagaggatacgggccggcacggagctgacctgggattataac
tacgaggtggggagcgtggaaggcaagaagctgctgtgttgctgcggatccacagaatgc
cgggggcgcctcttgtaa
DBGET
integrated database retrieval system
