Nanorana parkeri (Xizang Plateau frog): 108796832 Help Entry 108796832         CDS       T04897                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism npr  Nanorana parkeri (Xizang Plateau frog) Pathway npr04115   p53 signaling pathway npr04145   Phagosome npr04148   Efferocytosis npr04350   TGF-beta signaling pathway npr04510   Focal adhesion npr04512   ECM-receptor interaction npr04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:npr00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     108796832 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108796832 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     108796832 (THBS1)    04148 Efferocytosis     108796832 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     108796832 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     108796832 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108796832 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:npr04131]     108796832 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:npr00536]     108796832 (THBS1) Membrane trafficking [BR:npr04131]  Endocytosis   Phagocytosis    Opsonins     108796832 (THBS1) Glycosaminoglycan binding proteins [BR:npr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108796832 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_CFP_C TSP1_CCN cEGF TSP1_ADAMTS EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  108796832 NCBI-ProteinID:  XP_018423873 LinkDB All DBs Position Unknown AA seq 1176 aa AA seqDB search MGLTKGIFLLLMLSVPHTKQASENGADDNSVFDLFEITGVSRKLSSRKSQGVSLVKGPDP SSPAYRIENPNLIPPVPDEKFQDLLDSIRAERGFILLATLRQIKKTRGALLSIERKDGTG HVFSLTSNGEAGTLDLSVSIEDKQQVVSVEEARLATGHWKNITLFVQEDRAQLYMGCDKM ENAELDVPIHHILSTDLASTAQMRVAKGGVKDNFQGVLQNLRFVFGTSMDVILRNKGCSS SNYDLENSVNDSRPAIRTNYIGHKTKDVNGVCGISCNELKNMFLEMKGLKAVISTLQAKI QKVTEENMLIAEVVKVKVTPGGVCMHNGVKYNNMDEWTVDSCTECTCQNSVVICRKVSCP LIPCTNATIPDGECCPRCWPSDSPEDGWSPWSDWTPCSVTCGHGVQQRGRSCDSLNNQCE GSSVQTRSCIIQECDKRFKQDGGWSHWSPWSSCSVTCGTGMISRIRLCNSPVPQLNGKHC VGEGRENKPCQKDHCPINGEWGPWSPWDICSVTCGGGVQKRERLCNNPKPQFGGKDCLGD NIDSRICNKQDCPIDGCLSNPCFAAVTCTSFADGSWQCGACPTGYRGNGVDCTDVDECKE VPDACFNLNGVHRCENTEPGYNCLPCPPRYTGTQPFGKSIDDAKANKQVCNPRNPCLDGT HNCNRNAKCIYLGLYTDPMFRCECKPGYAGNGIICGEDTDLDGWPNENLTCVANATYQCK KDNCPNLPNSGQEDYDKDGIGDACDSDDDNDGIPDDRDNCAFVYNPAQYDYDRDDVGDRC DNCPYNHNPDQADTDGNGEGDTCSVDIDGDGILNEADNCPYVYNVDQKDTDKDGIGDQCD NCPLEHNPDQTDSDSDLIGDKCDSNEDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDAC DHDDDNDGIPDEKDNCRLVPNPDQIDSNGDGRGDVCQYDFDDDKIPDSEDVCPENYAIST TDFRKFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFV NTERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWDTTPTKAQGYSGLSIKVVNSTTGPGE HLRNALWHTGNTPGQVRTLWHDPRHTGWKDFTAYRWHLVHRPKTGFIRVVMYEGKKMMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atgggattaacaaagggtattttcctgttattaatgctgtcagtccctcacacaaagcaa gcatcagagaatggagcagatgacaacagcgtctttgatctgtttgaaataactggagtc agccgcaagttgagctctcgcaaatctcaaggagtttctttagtaaagggtcctgatcca tcaagcccagcttatagaatagagaatcctaatctaatacctccagtgccagatgaaaaa tttcaagatctgctggacagcattcgagctgagcggggctttattttactggctacttta cgtcaaataaagaagactagaggagcgctgttgtctatcgaaagaaaagacggcacaggc catgttttcagcctcacatccaatggtgaagctggaacattagacttgagtgtcagcata gaagacaagcagcaggtagtgtctgttgaagaagccaggctggctacaggccactggaag aacattacgctttttgtgcaggaagatcgagctcagctttatatgggatgtgacaagatg gaaaatgctgagcttgacgtgcccatccatcatattctttctacagacttggcaagcact gctcaaatgagagttgcaaagggaggtgtgaaagataattttcagggtgttctacagaac ctgcgttttgttttcggaaccagtatggatgtgattcttagaaacaaaggctgctccagc tcaaattatgatttggaaaactcagtcaatgactctcgtccagctatccgaaccaattac attggacataagacaaaggatgtcaatggtgtatgtggcatttcctgtaatgagctgaaa aatatgtttttggagatgaaaggtcttaaagcagtgatctcaactctccaggcaaaaata cagaaagttacagaggaaaacatgcttattgctgaagtagtgaaggtaaaggtgacacca ggcggtgtgtgcatgcataatggggtcaaatacaacaacatggatgagtggactgttgac agctgtaccgagtgcacatgtcagaattcagtggttatttgtcggaaagtttcttgccca ctaataccttgcaccaatgccacaattcctgatggagaatgctgccccagatgttggcca agcgactctcctgaagatggttggtccccatggtcagattggactccttgctctgtaaca tgtggtcatggtgtccagcaaagaggcagatcttgtgacagccttaataaccaatgtgaa gggtcctccgtccaaaccagatcttgcattattcaagaatgcgataagcgatttaaacaa gatggtggatggagtcactggtctccatggtcttcgtgttctgtcacttgtggaactgga atgatctctagaattcgtctttgcaattctcctgttccacagctgaatggcaagcactgt gtgggggaaggaagagagaataagccatgccaaaaagatcattgcccaattaatggtgag tggggaccatggtcaccttgggacatatgtagtgtgacatgtggaggtggtgttcagaaa cgcgagcgtctctgcaacaatcccaagccccagtttggtggtaaagactgccttggagac aatattgatagccgcatttgcaataagcaggactgccccattgatggatgcctatcaaat ccttgctttgctgcagtcacatgcacaagcttcgctgatggctcttggcagtgtggtgca tgccctacagggtataggggaaatggtgtcgactgtacagatgttgatgagtgcaaggag gtgccagatgcttgtttcaaccttaatggagtgcacagatgtgagaatacagagcctggg tacaattgtcttccctgtcctccacgttacactggcacacaaccatttggcaagagcata gacgatgccaaagcaaacaaacaggtctgtaacccacggaacccatgtcttgatggaaca cacaactgtaacaggaatgcaaaatgcatatacctcggcctttacactgatcccatgttt cgttgtgaatgcaaaccgggatatgctggaaatggaataatctgcggtgaagacacagac ttggatggatggcctaatgagaatctcacatgtgttgcaaatgctacatatcagtgcaaa aaagataattgccccaatcttcccaactcaggccaggaggattatgataaagatggaatt ggagatgcctgtgatagcgatgatgataatgatggaattccagatgacagggacaattgt gcatttgtatacaaccctgcccagtatgactatgaccgcgatgatgtcggtgatcgctgt gacaactgcccatacaaccataatccagaccaggctgatactgatggcaatggagaagga gatacctgctcggtggatattgatggagatggtattctaaatgaagcagacaactgcccc tatgtatacaatgtagatcagaaggatactgataaagacggcattggagaccagtgtgat aactgtcccttggagcacaatccagatcagactgactctgattccgatcttattggtgat aaatgtgacagcaatgaagacatagatgaggatggtcatcagaataacctggacaactgt ccttacatccctaatgccaatcaggctgaccatgataaggatggcaagggtgatgcttgt gatcatgatgatgacaatgatggcattccagatgaaaaagataattgcaggctggtgcct aatcctgatcagattgatagtaatggtgatggacgtggtgacgtctgtcagtatgacttt gatgatgacaaaattccagactctgaagatgtttgccctgagaattatgcaattagcaca actgactttcgtaaattccaaatggtgcctctggatcccaaaggaacatcgcagattgat cccaactgggtggttagacaccagggaaaagagctggtacagactgttaactgtgaccct ggcattgctgttggttttgatgagtttagtgcagtggatttcagtggcacctttttcgtc aacactgagagagatgatgactatgctggctttgtgtttgggtaccaatcaagcagcaga ttttatgtggttatgtggaagcaaatcacccagacctactgggacacaactcctactaaa gctcagggatactctggtctctctataaaagtcgtaaactcaaccactgggcctggagaa catttacgaaatgctctgtggcacacaggcaatacaccaggacaggttcgtactctgtgg catgaccctcgtcatacagggtggaaagattttactgcttacagatggcatttagttcac agaccaaagactggattcattcgtgttgtaatgtatgaagggaaaaaaatgatggctgac tcgggaccaatttatgataagacatatgctggaggaagattaggactgtttgtattctct caagagatggtgttcttttcagatcttaaatatgagtgcagagactcataa

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