Nanorana parkeri (Xizang Plateau frog): 108798080
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Entry
108798080 CDS
T04897
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108798080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npr04812
]
108798080
Cytoskeleton proteins [BR:
npr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108798080
Intermediate filaments
Intermediate filament-binding proteins
108798080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CH_2
PH_11
Motif
Other DBs
NCBI-GeneID:
108798080
NCBI-ProteinID:
XP_018425295
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MSSPLSPTDYDSLEIQQQYNDINNRWDLANDDDWDNENSSARLFERSRIKALADEREAVQ
KKTFTKWVNSHLARVTCRISDLYNDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENV
DKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVATEDNKEKKSAK
DALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLIEFDTLKKSNAHHNLQN
AFNTAERELGLTKLLDPEDVNVDQPDEKSIITYVATFYHYFSKMKALAVEGKRIGKVLDH
AIEADQLIENYEHLASELLQWIEQMIITLNDRKLANSLSGVQNQLQAFNTYRTVEKPPKF
TEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKSWERLEKAEHERELALRNELIR
QEKLEQLAARFDRKAAMRETWLSENQRLVSQDNFGLDLAAVEAAVRKHEAIETDIIAYSE
RVQAVNAVADELEAENYHDIRRILARKCNVSRLWDYLKELVAARRQRLLMNLELQRMFQD
LLYLMDWTDDMKGRLQSEDYGKHLHGVEDLLQTHTLVEADIAVQAERVKSVGTVSQKFMA
DDEGYKPCDPELVRKRVQLLEQRYSELCELSAARRSKLEESRRLWKFFWDMGEEEAWIRE
QSRLLLSDDHGKDLTSSLRLLSKHNAFRDEMSGRYGPLCLTVSDGEKLIAEGHFGASEIK
EKIADVKGQWKELEALAEDRECRLREAYSCYQFQADANDAEVWILDTLRLVSTSDVGHDE
YSTQTLIKKHKDVEEEILNHRPAIDTLHEQARCLPPAYSQSPEVDGRLPALEQRYEELVT
LAALRKQALQDSLALHKMFSEADACILWIDEKEQWLNGMEIPEKLEDLEVVQQRFDTLEA
EMNSLASRIASVNEVAGQLLSTDHRNEESIRDMQNQLNARWNQFRQLVGQKRNALDSALE
IQNYHLDCNETVCWMREKTKVIESTQSLGNDLAGVTALQRKLTGMERDLEAIQGKVGELH
SEAEKLASEHPPRASAITGHLSEIDETWDELKDTMKRREETLGEASKLQGFLRDLDDFQS
WLSRAQTAIASEDVPADLVEAERLLAQHESIKNEIARYGADYNGIRDVGEEVTRGQTDAQ
YMFLQQRLKALDTGWNELGQMWENRHELLSQGYSFQVFLRDTKQVEGFLNNQEYVLSHIE
MPTTLQAAEAAIKRHEDFMTTMDANDEKIRGLVESGKKLIQEQNVNSEKIQEKVTSIEER
HKKNRATAVEVLTRLKDNRDLQHFLQNCQELTLWINEKMLTAQDVSYDEARNLHSKWQKH
QAFMAELASNKDWLDKIDEEGQELIAEKPELEPVVREKLDALHSLWNDLESTTQSKAQCL
FDANRAELFTQSCSALESWLQNLQGQLHSDDYGKDLTSVNILLNKQQMLENQMEVREKEL
EAIQSQAQALGQEDANIVEVDSKHKMVEDKFLTLRAPLNDRRKLLLASKEGHQFNRDLED
XRMPMAISTEHGKDLPTVQLLIKKNQTLQKEIQGHQPRIDDILEREKSMVKNSSLDAQEI
GERLELLRSTWEELGTEAGKRHARLEESHAAQQFYADAAEAEAWMGEQELHMMSEEKAKH
EIGAQAMLKKHLVMEQALDDYAETIHQLANSSRDMVSRSHPESDRITLRQGQVDKLYASL
KDLAEERRGKLQEHQRLCQLKRDVEDLEHWISEREVVAASHELGQDYEHVTMLRDKFREF
SRDTSNIGQERVDAVNLMADELISSGHSENATVAEWKDGLNEAWADLLEMIDTRSQMLAA
SYELHRFYQDARETLGQIQDKHKLIPEETGRDLNTAEAMQRMHTTFEHDIQALSAQVKQV
QEDASRLQKAYAGEKAADIHRHEQAVTEAWGELQDASGARHQLLLDTVEKFRFFRMVRDL
VLWMDDINLQIDAQEKPRDVSSADLVIKNHQGIKAEVDARADSFTTCINLGNALLEKNHY
ASDKISEKLEQLQERRQEIENKWKEKMEWLQIVLEVLMFGRDANVAEAWLSSQEPIVRSS
ELGGNVDEVENLIKRHEAFQKAVSTWDERFFLLEKLTTLEEHELRRRWEEEERKRRPPTP
PPAEPKQEEIKQNHQQLQGLQTEQVSVNGLYTDSDSPQVVSGLDTSNGAKPDFISKNGSP
PPSPQLVSRATFSPINLQTSTLPISIPESLASEQLEGMLHRKQEMESHTKKAANRSWQNV
YCVLKKGSLGFYKDAKSAASGIPYHGEVPVQLSGALCSVAHDYKKRKNVFKLSLVDGKEY
LFQAKDEAEMSSWMRVINASLPSSPGDTSDRSPSAPKGLTRAMTMPPVSPNSATEGTVTL
RNKEGKEKDREKRFSFFKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccctgtcaccaacagactatgacagtttggagattcagcagcaatataat
gatatcaataaccgatgggatcttgcaaatgatgatgactgggacaatgaaaacagttct
gcacgtctctttgaaagatcaagaatcaaagcactagcagatgagcgagaagctgtccaa
aagaaaacctttacaaaatgggtcaattcccaccttgctcgggtgacctgtagaatttct
gatctgtataacgacctgagagatggaaggatgctcattcgactattggaagtgctctca
ggggaacagttgcctaagcccacaaagggtcgcatgcgtatccattgccttgaaaatgtt
gataaagcactacagttcttaaaggaacagaaagtacatttggagaatatggggtcgcat
gacattgtggatggcaatcacagactgacgctagggcttatatggaccattattcttcga
tttcagatccaagatattagtgttgcgacagaagacaacaaagaaaagaagtcggctaaa
gatgccttattgctctggtgtcagatgaaaactgctggatatcctaatgtcaatgttcat
aatttcacaacaagctggcgtgatggtcttgcatttaatgccattgtacacaagcacagg
ccagacctcattgaatttgacacactgaagaaatccaatgcacatcacaacctgcaaaat
gcatttaacactgctgagagagagctgggccttactaaacttctggaccctgaagatgta
aatgtggatcaaccagatgagaagtccattattacctatgtggcgacattttatcattat
ttttctaaaatgaaggctctggcagttgagggaaaacgtattggaaaggtactggatcat
gccattgaagcggatcagctaattgaaaactatgagcacttggcatctgagcttctgcaa
tggattgagcagatgatcattacactcaacgataggaagttggccaactctttaagtggt
gttcaaaaccagctgcaagcctttaacacctaccgcacagtagaaaagcctcctaagttc
actgagaaagggaatttggaagttcttctttttaccatccagagcaaaatgagagcaaat
aatcagaaagtatatactcctagagaaggaaagcttatatcggatataaacaagtcctgg
gaacgactggagaaagcagagcatgaaagagaacttgctctgcgcaatgaactgattcgc
caggaaaagctagaacagttggcagccagatttgaccgtaaggcagcaatgagagaaacc
tggctcagtgaaaaccagcgtcttgtatcacaggataacttcggcttagatttggctgca
gttgaagctgcagtacgaaaacatgaagcaattgagacagacatcatagcatatagtgag
cgtgttcaagccgtgaatgcagttgcggatgaattggaagcagagaattatcatgacatt
cgaaggattttggctcgcaaatgcaatgtgtcacggttatgggattacttaaaggaattg
gtagctgccagacgtcagaggcttctaatgaacctagagttgcagaggatgtttcaagat
ctattgtatctcatggactggacagatgatatgaagggtcgtctgcaatctgaagattat
ggaaagcatctccatggggtggaagatttgctccaaactcatactctagtggaggctgat
attgctgtgcaagcagaacgtgtaaaatctgttgggacagtttctcagaaatttatggca
gatgatgagggttacaaaccttgtgatcccgaattagtaagaaagagagtccagcttttg
gaacagcgctattcagaattatgtgagctttctgcagcacggaggtcaaaattggaagag
tcccgccgtctctggaaatttttctgggatatgggtgaggaggaggcctggatacgggaa
caaagtcgccttctgctatccgatgaccatggaaaggatctcaccagctcgttgagacta
ctaagcaaacataatgcctttcgagatgaaatgagtggacgttatgggcctttgtgtcta
acagtatctgatggtgaaaaattgattgcagagggtcacttcggagccagtgagattaaa
gaaaagatagcagatgtcaaaggtcaatggaaagagctagaagctctggctgaagatagg
gaatgtagactgagagaagcctacagttgttatcagttccaagctgatgccaatgatgct
gaagtctggattttggacaccttgcgcctggtttccacaagtgatgtgggccatgatgag
tactccacacagacattaattaagaaacataaggatgttgaagaggagatactcaaccac
cgaccagctattgacactttgcatgaacaagctcgctgtctgccaccagcttactctcag
tctcctgaggttgatggaagactccctgctttggaacagcgatatgaagaactggtaacc
cttgccgccctccgtaaacaagcacttcaagactccctagctcttcataaaatgttcagt
gaggctgatgcttgtattctctggattgatgagaaagagcaatggcttaatggaatggag
attcctgaaaagctagaagaccttgaagtggttcaacaaaggtttgatacactggaggca
gaaatgaatagcttggcatccaggatagcatctgtgaatgaagtggctgggcagcttctc
agcacagaccacagaaatgaagaaagtatccgagacatgcagaatcagctaaatgctcgt
tggaatcagttccgccaactggttggtcagaagaggaatgctcttgactctgccctagaa
attcaaaattatcacttggactgtaatgagacagtttgctggatgagagaaaagaccaaa
gtcatagagtccacacagagcctgggaaatgacctggcaggagttactgctcttcaacgc
aaactcactggtatggaacgtgatctggaggccatacaaggaaaagttggggaacttcat
tcagaagcagagaagcttgcttcagaacacccaccaagagcctccgctattactggtcac
ttatctgagatagatgagacttgggatgaattaaaggataccatgaaacgaagagaagaa
accctaggggaagcaagcaagttgcaaggatttttgcgtgacttggatgacttccagagt
tggctgtcccgagctcaaactgccatagcatctgaggatgtcccagctgacttggtcgaa
gcagaacgcttgcttgcacagcatgaaagcataaagaatgaaattgcacgttatggagca
gactacaatgggattagagatgttggggaggaagtaactcgtggtcagactgatgcccag
tatatgtttctgcaacagcgacttaaggctctggatactggctggaatgagctgggtcaa
atgtgggagaatcgacatgagctgctgtcccaaggttacagcttccaagtgttccttaga
gatactaaacaggtggagggcttcctaaataaccaggaatatgtgttatcccacatagaa
atgccaacaacccttcaggcagctgaagctgcaataaaacgtcatgaggacttcatgacc
accatggatgctaatgatgaaaagatccgagggcttgtggagtcggggaagaaacttatc
caagagcaaaatgttaactctgagaagattcaggagaaggtcacatccattgaagaaaga
cacaagaaaaacagagcaacagctgttgaagttttaactcgcctgaaggataatcgtgac
ctccagcactttcttcagaactgtcaagaacttactttgtggatcaatgagaagatgttg
actgctcaagatgtctcttatgatgaagcccgtaatctgcacagcaagtggcaaaagcac
caagcatttatggctgaactggcatcaaataaggactggctagacaaaatagacgaggaa
gggcaagagctcattgcagaaaagccagaactggaaccagtggtgagagagaagttggat
gcccttcatagcctatggaatgacttggaatccactacacagagtaaagcacaatgcctt
ttcgatgccaacagggcagaattgttcacacaaagctgctctgcgctcgaaagttggtta
caaaatctccaggggcaacttcattcagatgattatgggaaagatcttactagtgtaaac
attctactcaacaagcaacagatgctggagaatcagatggaagtgagggagaaggagctg
gaggctatccagagtcaggcccaagctttgggtcaggaagatgccaacatagtagaagtt
gactctaagcacaagatggtagaagacaaattcttgacactgcgtgcgccactcaatgat
cgaaggaagttgttgttggcttctaaggagggtcaccagtttaacagggatttggaagat
nngagaatgccgatggccatatctacagagcatggaaaagatcttccaactgtacaactt
cttataaagaaaaaccagacactgcaaaaggaaattcaaggacaccagcctcgaattgat
gatatcttggaaagagagaaatctatggtgaagaacagttctctagatgctcaggagata
ggagagagattagagttgttacggagcacatgggaagagcttggcactgaggcaggaaag
aggcatgcacgtctagaggagtcccatgcagcgcagcagttttatgctgatgcagcagag
gcagaagcctggatgggagaacaggaactgcacatgatgtctgaggaaaaggccaagcat
gagattggtgctcaggctatgctaaagaaacatctggtgatggagcaagctcttgatgac
tatgcggaaaccatccatcagctggccaactccagcagggatatggtttctagaagccac
ccagagagtgaccgcattaccttgcgtcaaggacaggttgataagctatatgctagtctt
aaagacttggcagaagagagaagagggaagttacaagaacaccaaaggctctgccagcta
aagagagatgtagaagacctggaacactggatttcagaacgtgaagtggtagcagcttcc
cacgagttagggcaagactatgaacatgtaacaatgctgagagataagttccgtgaattc
tctcgtgacaccagtaatattggccaggaaagggtggatgctgtcaacctcatggctgac
gagcttatttcatctggacattcagaaaatgcaactgttgctgaatggaaagatggcctt
aatgaggcttgggctgatctcctagaaatgattgatacacgaagccagatgctagccgcc
tcctatgagctccaccgcttctatcaagatgctcgagaaacattgggtcagatacaagac
aaacataaactgattccagaagagactggcagagatctcaacactgcagaagctatgcag
cgtatgcacacaacatttgaacatgacattcaagctcttagtgcacaagtaaagcaagtt
caggaggatgcttcgcggcttcagaaagcttatgcaggtgaaaaggctgcagacatccat
aggcatgaacaagcagtgactgaagcctggggagagctgcaagatgcaagcggcgcccga
caccagctcctcctagacacagtggagaagtttcggttctttaggatggttagagatctc
gtgttgtggatggatgatatcaacctacagattgacgctcaggaaaaaccaagggatgtt
tcctcagctgatctggttattaaaaatcaccaaggcatcaaggcagaagttgatgctcgt
gcagacagttttactacttgcataaacctgggaaacgctctcctagagaagaatcactat
gcctctgacaagatctctgaaaaactggaacagctgcaggagaggaggcaggaaatcgaa
aataaatggaaggaaaaaatggaatggctgcaaatcgtgcttgaagtgcttatgtttgga
agagatgccaacgtggctgaagcttggctttccagccaggagcctatcgtccggtcatct
gaacttggtggcaatgtagatgaagtagaaaacttaattaagagacatgaagccttccag
aaagcagtatctacttgggatgaaagattttttcttctagaaaaactgaccacgttggag
gagcatgagttgagaaggaggtgggaggaagaggagagaaaaagacgaccaccaactcca
cctccagcagaaccaaaacaagaggaaataaaacagaaccaccagcagttacaaggcctg
caaacggaacaagtttctgtgaatggactgtatacagactcggactctccgcaggtagtc
agtgggcttgatacgtcaaatggagctaagccagactttatttcaaaaaatggaagcccc
cctccatcaccacagctagtgtccagagcaactttttctccaataaaccttcagacgtcc
acgttgccaattagtattcctgaatctttggcatctgaacagttggagggtatgttgcat
cgtaagcaggaaatggagtcccatacaaagaaagctgcgaataggtcctggcagaatgtc
tattgtgttttgaagaagggtagtctgggattctacaaagatgcaaagagtgcagcaagt
ggcattccttatcatggtgaggttcctgttcagcttagtggtgccctatgcagtgtggcc
catgactacaagaaacgcaagaatgtcttcaagctaagtttagtagatgggaaagaatat
ctcttccaagcaaaagatgaggctgaaatgagtagttggatgcgggtgatcaatgcttcg
ctgccttcttcacctggtgacacctcggaccgttctcctagtgcacccaagggtttaaca
cgagcaatgactatgccaccagtgtcccccaatagtgccacagagggcacggtaacactg
cgcaacaaggaaggaaaagagaaagacagagaaaagcgctttagcttctttaagaagaaa
tga
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integrated database retrieval system
