Neodiprion pinetum (white pine sawfly): 124213311
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Entry
124213311 CDS
T08966
Symbol
ago
Name
(RefSeq) F-box/WD repeat-containing protein 7
KO
K10260
F-box and WD-40 domain protein 7
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124213311 (ago)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npt04131
]
124213311 (ago)
04121 Ubiquitin system [BR:
npt04121
]
124213311 (ago)
Membrane trafficking [BR:
npt04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
124213311 (ago)
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124213311 (ago)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EML_2
F-box-like
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
F-box
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
PQQ_2
Beta-prop_VPS8
KNTC1_N
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
124213311
NCBI-ProteinID:
XP_046470474
LinkDB
All DBs
Position
2:complement(2430718..2438176)
Genome browser
AA seq
649 aa
AA seq
DB search
MSTPSSSSKALGGEKPGGTSPSPVEGVEGVPGPSTLDPLQSALVHDGESEDYGEEGEEEE
EDSMDEESETSDGGMYCDAECGEENDANDCHSLSLQSSPTLPPRPLSPILHTCVPLDAVQ
PQRKRKSEAESTLPCKKLNPEEKTYIMVVKRVDDKGKHVRSIIPTRDNPPPEMSSWLLQF
QRWSNAERMLAIDELIERCEPTQVRHMMQVIEPQFQRDFISLLPKELALSVLAFLEPRDL
LRAAQTCRNWRFLADDNLLWKEKCRATGIEDLKDLPTPKRKNSRNSNSCSSPWKQAYMRQ
HNIKMNWRTKPIRTPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVTGKCLRTLV
GHTGGVWSSQMSGTTVISGSTDRTLKVWNAETGQCIHTLYGHTSTVRCMHLHGNKVVSGS
RDATLRVWQVDTGECLHVLVGHLAAVRCVQYDGKLVVSGAYDYMVKVWNPEREECLHTLQ
GHTNRVYSLQFDGIHVVSGSLDTSIRVWEVETGACRHTLMGHQSLTSGMELRNNILVSGN
ADSTVKVWDIVSGHCLQTLSGPNKHQSAVTCLQFNSHFVITSSDDGTVKLWDVKTGDFIR
NLVALESGGSGGVVWRIRASDTKLVCAVGSRNGTEETKLLVLDFDVEAK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccccttcgtcgtcgtccaaggcgttaggaggagaaaaaccaggaggtacaagc
cctagtcccgttgaaggtgttgaaggtgttccaggaccaagtacactagatcctctgcaa
tccgcacttgtgcacgatggggagtctgaggattatggagaagaaggcgaggaagaagaa
gaggatagtatggatgaagaaagcgagacaagtgatgggggcatgtattgcgatgccgaa
tgtggagaagagaatgatgccaacgactgccattcgttatcgttgcaatcatcgccgaca
ttaccaccgagacctcttagtcccatacttcacacatgtgttccactagacgcagtacag
cctcagaggaaacgtaaaagcgaagctgagtctacactgccctgtaaaaagcttaaccca
gaggaaaagacttatattatggttgtgaaacgggttgacgacaaagggaagcatgtgaga
agcatcattccgacccgagacaatcccccacctgaaatgagcagttggttattacagttt
cagagatggtcaaatgcagaaaggatgttggctattgatgagctaatagaaagatgcgaa
ccaacccaagttcggcatatgatgcaagtcatcgaaccacaatttcagagggactttatt
tcgttactccctaaagagttggcattgtcagtcttagccttcttagaaccaagagattta
ttgcgagccgcgcaaacatgcagaaattggcgctttcttgcagatgacaatctattgtgg
aaagaaaaatgccgagcaaccgggatagaagaccttaaagatctacctacgccaaaacgt
aaaaatagtcgaaattcaaatagttgctcctcgccatggaagcaggcatatatgaggcag
cataacataaaaatgaattggagaactaaaccgattcgtacacccaaagtcttaaagggt
cacgacgatcatgtcattacctgtctccagttttctggcaatcgaattgtcagtggctca
gacgacaataccctcaaagtttggtctgctgttacaggaaagtgtttaagaacactggtt
gggcatacgggtggtgtctggtcctcacagatgtctggtactacagtaatcagtgggagc
acagaccgcaccttaaaggtttggaacgcagagacgggccagtgcatacatacgctttac
ggtcacacatcgacagtaaggtgtatgcacctccatggcaacaaggtggtcagtggcagc
agagacgctacactaagggtgtggcaagttgatacaggggagtgtctccatgttttggtc
ggacatctcgcagctgttagatgcgtgcaatatgatggaaaactcgtggtcagtggggct
tatgactatatggtcaaagtatggaatcctgaacgagaagagtgccttcacacactgcaa
ggacataccaatcgcgtttattcccttcaatttgacggtatccatgtggtgagtggatcg
ttggacacgagcattagggtatgggaagttgagacgggagcgtgtaggcacaccctgatg
ggtcatcagtctcttacttcgggcatggagctccgtaacaatattcttgtatctggtaat
gccgattctacagtcaaagtttgggatattgttagtgggcattgtctgcaaactctttcc
gggccaaacaaacatcaatccgcagttacctgtctgcagtttaacagtcactttgtgatt
acatcctctgatgacgggactgtcaaactgtgggatgttaagactggagacttcataaga
aatcttgtggctctggagagtgggggtagtggaggtgtagtttggagaattcgagcaagc
gatacgaagctggtgtgtgccgtgggcagtcgtaatggtaccgaggaaaccaaactgctg
gttcttgactttgacgtagaggccaaatag
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