Neodiprion pinetum (white pine sawfly): 124216261
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Entry
124216261 CDS
T08966
Symbol
IntS1
Name
(RefSeq) integrator complex subunit 1
KO
K13138
integrator complex subunit 1
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124216261 (IntS1)
Spliceosome [BR:
npt03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124216261 (IntS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Ezh2_MCSS
Motif
Other DBs
NCBI-GeneID:
124216261
NCBI-ProteinID:
XP_046476519
LinkDB
All DBs
Position
4:complement(41621527..41630381)
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AA seq
2071 aa
AA seq
DB search
MDRVKTGTGRGAKSKIAQHPADLFALGSKSSRGEATDSKRPGVIHGKPGPSSTSSSDRKK
EAPPGSLQSLIPQKKAKLAPHVPHSRPPMLSSETWEGVAIDCDPADLAPMVLEASENDEA
DKVVGLVCGAVRTLKNQRWKPDTLIYMGLMYLAKIRPSIFSNDCILHALSSLLKRDQTHN
FKSKGNPLVPVLAANLLMRGFHEKRNWPEIFVKLYIEDALGERVWVDNEECKGFVDNILT
GFNTRHPPKSILQPDVSILTPRECHSPSTLEDDDPATSAIQLSGDKEKIEFPVMPRYAHC
IENIELVVLETVKEQLNRRQPESITRNFLKLLSFACGFVEIRIIAVPKLEMWLHNPKLMR
PAQELLSYVCYNCITHTQRDVEVISQLVKMRLKTKAVINIYLNGVRELISLHPENLSTTL
KHTIYNELSSARNPNNMPMLAVMFQAAPEAAARLLAEIFQDLLMNREDYLRPLRALLREI
VRVCRHDINLLTLARTLMAERKEISQQLLSFEFKDRVFVSIIDLLCLCMFLAISPQVKEA
ALLAQRGDKKDVALLQQFQNLVATLQYESVSWLQNLAPQMYSVGRNELIHALHKILLLES
PDHYYKLDNWPPESDRVFYIRLVSDVPLLQSTLLRLLLIGFSKENGVTHSETLEVADQLI
RRAALNSSESYPTLAADKMDIIELIFNLCVYQPPGSINIPPDYEPPTLAISNLYWKGWIM
LLILAAHNPYSFGAVGWKRYPILQTFMEMCITNHFSYPPPTMALPEVSEQERAKELQVEA
LEKQKILEYETHLAAASTRMQISEQNSLLLSQLITMDPTGIARRPPPAVLEQLQSLNVSH
RLGHLLCRSRRPDFLLHIIQRQQQSSSQSMPWLADLVQNSEGALSQLPVQCLCEFLLSTS
VQAGDKQPRQQQLLAHLQKLLTDPTQDQQHAYEVLEYFLKRLSSQQSASRAQAITGLETV
LRSIPLEEESMEVEGESEKEIWLLRKLPSIPYFLSVRSLVSTALRGACQVENCPDLVRAY
IAYLAVHTLDDDLTELIDLVNEISQLVVERSTIIAAILPQPDNESIQSKQTLHAFMAIFC
NYLQKARAPRGEGYTWSESQDQILVQWNTGEECTMHILVVHAMIILLTYDPSDDPGLFNE
LLETWFPEKNEPPKAFLVDTSEEALLIPDWLKLRMIRSNVPRLVDAALKDLEPPQLVLFI
QSFGIPVCSMSKLLHTLDAAVQIDPSSVGEAVLDKTYMAQLVEVQHRRGATGGLVFVQVL
QLVEPPLPDESHFVFEKLQIRLPPSAMVQKQSLIQCSVKTEVPHLINRLFIENISTNQKV
DAYRRLHKILTGDLQNPVNQNGTVVLAIQHICSVLSSMQVEQFLASLILMTQFSCTLMRI
ILSPLKKPSTPQHVFDLGRNMCLNLISLMGDIKAPILCILKDFANMQSSKDHQRKELAAL
TKNRDPLTILGNMDQLNLERVGRKLLDKCLKQQNNDVLVEAMAKLLVSDSNEGVIKPRTG
LLIDWLAAVEPELLGTCTNLQMKLLFAKTAVKVKTDNSVVSSHACRPYLLTLLTHRASWA
TLHKCVGHLLDKCDNVYDPTAVLDFLWALTCNPKLWQGRDKFTPKHYIPEDILLLSEKQL
LNLVTYLVNEAVVICNQQSRKAALNQMEGRLDLLLHCVSTEEKLICSVVKHLASQMEDFD
GVHSDMAHQFLLHMYMKVPKVICYLDASQSKKFVSDAKITDWTGSVLDCTSHSLLTALAA
TPRQKSWVSKSQEFEVCARKMAAVHPILVLRQLPMLASSLMGRSYLDFGQFRTGHHLNLF
VQVMGLLELLQPHLFNEEHRIAFEDTLENYFQCFQHYGPIKDLISLLNRFVALVQAYISH
DAQKAMKYLYRHSHILHELQLQNPGLASLRTLMSGIPVPRDCEDEDGEEVIVAVVPPPPP
PEPTIPQHWASLLATLNKLHGEEVFMALQEIEHLSSRKPSVLELVSDSISELILSPQGNI
RSLAHTLLARALKHRPASNQNILAAFHRCLESPRADVLMSALDRLPDVVVCMQEHALPLM
QKVFELGVNSNVNTIPHINKSIALLNIQQGC
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgtaaagactggaacaggccgtggggccaagagcaaaatagctcagcatccc
gcagacttgtttgctcttggatcaaaaagttccagaggtgaagctacagattccaagcga
cctggtgtgatccatgggaagccaggcccgagttctacctcaagttcagatcgtaagaag
gaagctccaccgggatcattgcagtcacttattcctcagaaaaaagcaaaattggctcca
catgtcccacattctcggcctccaatgttaagctcggagacttgggagggtgtagccatt
gattgtgatccagcggatttagccccgatggtcctcgaagcaagtgaaaatgacgaggct
gataaagttgttggacttgtttgtggagctgtgagaacacttaaaaatcagagatggaag
ccagacactttaatttatatgggtttaatgtatttggccaaaatacgcccatctattttt
tcaaatgactgtattctgcatgctttgtcgtcgctcctcaaacgagatcagacacataat
ttcaagagcaagggaaatcccttggtaccagtgctagcggccaatttattgatgagaggc
tttcacgagaagaggaattggccagaaatatttgtcaaactttacatcgaggatgcactg
ggtgaacgagtctgggtagataacgaagagtgtaaaggatttgtggataacattttgacg
ggtttcaacacgaggcacccacccaaaagtatattacagccggatgtgtcgatattaaca
ccgagggagtgtcacagtccatcgacattagaggatgacgaccccgccacctctgctatt
cagttatccggagacaaagaaaaaatcgagtttccagttatgcccagatacgcacactgc
atagaaaacattgaattggttgtgttagagacagtaaaagaacaattgaacagacgtcaa
ccagagtcaataaccagaaactttttgaaattactctccttcgcttgcggctttgtagaa
attcgaatcatcgctgttccaaaattagaaatgtggctacacaatcccaagcttatgaga
cctgctcaagaattactcagttatgtctgttataattgtataacgcacacacaaagagac
gttgaagtgataagtcagttggtgaaaatgaggcttaaaactaaggcggtaatcaacata
tatctgaacggtgttagagagctgataagcctccacccagaaaatttatcaacaactctg
aaacatacaatctataatgagttatccagtgctagaaatccaaataacatgccgatgctt
gcagttatgtttcaagctgctcctgaagctgctgcaagattacttgccgaaatatttcaa
gatttgcttatgaatcgcgaggattatttaagacctttaagggcattgttaagggaaata
gtccgtgtatgcagacacgacataaatctgctcacattggcgcgtacgttgatggcagaa
agaaaagaaatatcgcagcaactgctcagcttcgagtttaaagacagagtttttgtatcg
attattgatttattgtgcttgtgcatgtttttggccatcagccctcaagtcaaggaggct
gccttgctggctcagagaggtgacaaaaaagatgtagccctcttgcaacagtttcaaaac
ttggtcgccactttacagtacgagtctgtttcctggcttcaaaatttagcaccgcagatg
tacagtgttggaaggaacgagctaattcatgccttgcataaaatattgctgttagaatct
ccggaccattattacaagctggataactggccaccagaatcagatcgagtcttttacatt
cgtttagtatcggatgttcctctactgcaaagcacgttgttaagattactgctgataggg
ttttctaaggaaaatggtgtaacacattctgaaaccttggaagtagctgatcaactgata
aggcgagcagcattaaactcctctgaaagctatcctactctagcagctgacaagatggac
ataatagaactgattttcaatctttgcgtctatcaaccaccaggttctatcaatattcct
ccagattacgagccaccaactttggctatatcaaatttgtattggaaaggttggataatg
ctactgatactagcagcccataatccatattcattcggtgcagtaggatggaaaagatat
ccaattttgcaaaccttcatggaaatgtgtataacaaaccacttttcatatcccccacca
acgatggccttacctgaagttagtgaacaagaacgagctaaggaactgcaagtagaggcg
ctagagaagcaaaaaatactagagtatgaaacccacttggccgctgcatcgacgagaatg
caaatttccgaacaaaatagtcttttattatctcaattaatcacaatggatccgaccgga
atagcaagaagacctccgccggcagttctggaacaattgcagtctctaaacgtatctcat
cgcctaggacatttgctctgtcgctcacgacggcctgactttttgctgcacataatccag
aggcagcaacaaagctcatctcagagcatgccatggcttgctgatcttgttcagaacagt
gagggggcgttgagccaattaccagttcaatgtctctgtgagtttttattatcaacgagc
gttcaagcaggcgataaacaaccaaggcagcagcaactacttgctcacctgcagaagtta
ctcacagatccaactcaggatcaacaacatgcgtacgaagtattggaatactttttgaaa
cgattaagcagccaacaaagcgccagtcgagctcaagcaatcactggtcttgaaactgtg
ctgaggtctattcctctggaggaggaaagcatggaagttgaaggcgagagtgaaaaagag
atatggttactgcgcaagctgccttccatcccttacttcctgtctgttcgctcgttagtt
tctacagcactgcgtggcgcttgtcaagttgaaaactgcccggatttagtgcgagcatac
atagcatacctagctgtgcatacactggacgatgatctcacggaactaattgatctggtg
aatgaaatttcgcaactagtcgttgaacgaagtacgattatagccgccatcttaccgcaa
ccagacaatgagagcatacaatctaagcagacactgcacgcttttatggcaatattttgt
aattaccttcaaaaagctagagcgccgagaggcgagggatatacttggtccgaaagtcag
gatcaaatacttgttcagtggaataccggagaagagtgtaccatgcacattctagtcgtt
cacgccatgatcatcttactgacttatgacccgtcagatgatccaggattgtttaatgaa
ttactggaaacctggtttccagagaagaacgaaccgcccaaagcgtttctcgttgacact
agtgaagaagccctcttgattccggattggctaaagttaaggatgattagaagcaatgtc
ccccgtctggttgacgctgctttgaaagacttggagcctcctcagctggtattgttcatt
caaagctttggaatcccggtctgttctatgagcaaattgttgcacacccttgatgcagcg
gtacaaattgatccgagttcggttggcgaggctgttttagacaaaacttacatggcacaa
ttagttgaagttcaacatagaaggggtgcaactggaggcctggtctttgtgcaagttttg
cagcttgttgaaccgccgttgcctgacgagagtcatttcgtatttgaaaaactacaaata
cgcttaccgcccagtgcgatggtgcaaaaacagtcgttgatacagtgctcggttaaaact
gaagtgcctcatcttatcaatagacttttcatcgaaaatatatccaccaatcaaaaggtt
gatgcttatcgaagattgcacaagattttaacaggggatctgcagaatcctgttaatcaa
aacggaactgttgttcttgcaattcaacatatatgcagcgttttaagctccatgcaagtt
gaacagttcttggcatcgctcattcttatgacacagttctcgtgcactttgatgcgcatt
attttgtcaccactaaaaaaaccgtctactccccagcatgtatttgaccttggacgtaac
atgtgcttgaatttgatctcattgatgggggatataaaggcaccgattttgtgtatatta
aaggactttgccaacatgcaatcgagcaaggatcaccagcgcaaagaactcgcagctctg
acgaaaaatcgcgacccgctaactatactgggaaatatggatcagttgaatttggaacgc
gtcggacgcaaacttttggacaaatgcctgaagcaacagaacaatgacgttctagtcgaa
gccatggccaagcttcttgtttccgatagtaacgaaggtgttataaaacctcgaaccggc
ctccttattgactggctggctgcagttgagccagaactacttggaacatgtacaaatctt
caaatgaaattattgttcgccaagactgcagtgaaggttaaaactgacaatagtgtcgtc
agttcgcacgcttgtaggccctacttgttgacattgttgactcatagagcaagttgggct
acgcttcacaagtgtgtaggacacttactcgataagtgtgacaatgtgtatgatccaact
gccgttctcgactttttgtgggcgttgacttgcaacccaaagctctggcaaggcagggat
aaattcactccaaaacactacatccctgaagatattctacttctgtctgaaaagcagtta
ctaaatcttgttacgtatctggtaaatgaggctgtagttatttgcaatcagcagagtaga
aaagctgcactcaatcagatggaaggaagactggatttattactgcactgtgtatctacg
gaagagaaactcatctgtagcgttgtcaagcatctggcttctcaaatggaagattttgat
ggagttcactctgacatggcgcatcaatttttacttcacatgtacatgaaagtacctaaa
gtaatatgttacttggacgcatctcagtcaaagaaatttgtcagtgatgcaaaaatcaca
gactggactggttcggtacttgattgtacaagccattcgttgctaacagcattagctgca
accccacgtcaaaaatcatgggtctcaaaatctcaagagtttgaagtttgcgctagaaaa
atggctgctgttcaccctattctggttttacggcaattaccaatgctcgcttcctctctt
atgggaagatcgtatttagattttggtcaattccgaaccggtcatcacttgaatctcttt
gtccaagtgatgggcttattggaactattgcagccacatttgtttaatgaagaacacaga
atcgcatttgaggatacgctcgaaaactatttccaatgcttccagcactacgggccgata
aaggatctcatatcacttctcaatcgatttgtcgctctggtccaggcttacatttctcac
gatgcgcaaaaggctatgaagtatttgtacagacattcgcacattttgcatgagctgcaa
ctccaaaatccaggattagccagcttgcgtacattaatgtcaggcatcccagtaccaaga
gattgcgaagacgaggatggagaagaggtgatagttgctgtcgtaccaccgccaccacca
cctgaaccaacaattccccagcattgggcatctttacttgcgacactgaacaaactgcac
ggagaagaagtttttatggcactccaagagattgaacacttgtcatcccgcaagccgtct
gtcctggagctggtgagtgactccatatctgagctcattttatccccacaaggcaatatc
cgctccttagctcacacactgttagcgagggccttgaaacaccgcccagcatcgaatcaa
aacattcttgccgcatttcatagatgcctagaaagtcccagagcagacgttttgatgtct
gcgctcgatagattgcctgacgtcgtcgtgtgtatgcaagagcacgcattaccactgatg
caaaaagtgtttgagcttggagtaaactcaaatgtgaacactattcctcacataaataaa
agtatcgctttgttaaacatacagcagggctgttaa
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integrated database retrieval system
