Novosphingobium resinovorum: BES08_07895
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Entry
BES08_07895 CDS
T04490
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nre
Novosphingobium resinovorum
Pathway
nre03030
DNA replication
nre03410
Base excision repair
nre03420
Nucleotide excision repair
nre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BES08_07895
03410 Base excision repair
BES08_07895
03420 Nucleotide excision repair
BES08_07895
03430 Mismatch repair
BES08_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nre03032
]
BES08_07895
03400 DNA repair and recombination proteins [BR:
nre03400
]
BES08_07895
Enzymes [BR:
nre01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BES08_07895
DNA replication proteins [BR:
nre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BES08_07895
DNA repair and recombination proteins [BR:
nre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BES08_07895
NER (nucleotide excision repair)
GGR (global genome repair) factors
BES08_07895
MMR (mismatch excision repair)
DNA ligase
BES08_07895
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BES08_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AOR76677
UniProt:
A0A1D8A3J8
LinkDB
All DBs
Position
complement(1700153..1702288)
Genome browser
AA seq
711 aa
AA seq
DB search
MTADSPNEAEAANELMRLARQINRANRLYHAEDAPEITDADYDALVRRNAELEAAFPHLT
RPDSPSCKVGHEVAASPLGKVTHEVRMMSLDNAFTDEEVGEFLTRVRRFLSLAAEEPLVM
TAEDKIDGLSCSLRYEHGKLVRAATRGDGQVGEDVTANVAHIADVVQELEGEDIPEVFEV
RGEVYMEKGAFLALNTQLMDEARALADSKGEAFDDSKVRQFANPRNAAAGSLRQKDASVT
ARRPLRFWAHGWGAASHVPGASQHEVIRRIESWGLPVSPQFRQCHSLEEMLAAYRAIRDG
RAALPFEIDGVVYKVDRLDWQQRLGFVAKAPRWGMAHKFPAERAETTLESIDIQVGRTGK
LTPVGRLKPVLVGGVTVTNVTLHNRDEIARLGVRPGDRVVLQRAGDVIPQVVDNLSREEE
RAAYVFPDHCPQCQSEAVAAEGEVDVRCTGGLICPAQRTERLKHFVSRAALDIEGLGEKT
IDEFFAQGWLESPADIFRLRKRREEILALEGWKDKSVDNLLAAVESKRSPDAARLLFGLG
IRHVGAVTARDLLKRFTTLPELRALAEQAQVKQVEDEVKAASDAYAELISIDGVGPVVVE
ALGDFFHEEHNRAVWDDLLSEVSPPPYVVETKESEVSGKTVVFTGKLETMSRDEAKAQAE
RLGAKAAGSVSPKTDILVAGPGAGSKLKKAAELGIRVLSEEEWAEIVRAAG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgattccccgaacgaagccgaagccgccaacgaactcatgcggcttgcgcgc
cagatcaaccgcgccaaccgcctctaccacgccgaggatgcgccggagatcaccgacgcc
gattacgacgcgctggtgcggcgtaatgcggagctggaagcagcgttcccgcatcttacg
agacccgattcgcccagttgcaaggtcggtcacgaagtcgctgcctcaccgctcggcaaa
gtgacgcacgaggttcgcatgatgagcctcgacaatgccttcaccgacgaggaagtcggg
gagttcctgacgcgcgtgcggcggttcctgtcacttgccgccgaggaaccactggtgatg
acggcggaggacaagatcgacggcctctcctgctcgctgcgctatgagcacggcaaactg
gtgcgcgccgccacgcgcggggacgggcaggtgggcgaggacgttaccgccaacgtcgcg
catatcgccgacgtcgtgcaggaactcgaaggcgaggacattcccgaggtcttcgaggtg
cgcggcgaagtctacatggaaaagggggcgttcctcgcccttaacacccagttgatggat
gaggcgcgcgcgctggccgacagcaagggcgaggcgttcgacgacagcaaggtccggcag
ttcgccaacccgcgtaatgcggctgccggctcgctgcgccagaaggatgccagcgtcacc
gcgaggcgccctttgcgcttctgggcgcacggttggggcgccgccagccatgtgcccggc
gcgagccagcacgaggtcatccgtcggattgaaagctggggcctgccggtctcgccgcaa
ttccgccagtgtcactcgctcgaagaaatgctggccgcctaccgcgccattcgtgatggc
cgcgccgcgctgccgttcgagatcgacggggtggtctacaaggtggaccggctcgactgg
cagcagcggctgggcttcgtcgccaaggcgccgcgctggggcatggcgcacaagttcccc
gcggagcgagcggagaccacgctcgaatcgatcgatatccaggtcgggcgcaccggcaag
ctgacgccggtgggacgcctcaagccggtgctggtgggcggcgtgacggtcaccaacgtg
acgctccacaaccgcgacgaaattgcccgcctcggcgtgcgccccggtgaccgggtggtg
ctccagcgcgcgggcgacgtcatcccgcaggtggtggacaacctctctcgcgaggaggag
cgcgccgcttacgtgttcccggatcattgcccgcagtgccagtccgaggcggtcgcggcc
gagggtgaagtcgatgtgcgctgcactggcgggctgatttgcccggcgcagcggaccgag
cgcctcaagcacttcgtcagccgcgccgcactcgacatcgaggggttgggcgaaaagacc
atcgacgaatttttcgcgcagggctggctcgaaagcccggccgacatcttccgcctgcgc
aagcgccgcgaggaaatcctggccctcgaagggtggaaggacaagtctgtggacaacctg
ttggcggctgtggaaagcaagcgcagccccgacgccgcccggctcctgttcggcctcggc
atccgccacgtcggggccgtgaccgcgcgcgatctcctcaagcgcttcacgacgcttccc
gaattgcgtgctctcgccgagcaggcgcaggtcaagcaggtcgaggacgaagtgaaggca
gcaagcgacgcctatgccgaattgatctccatcgacggcgtcggcccggtggtggtcgag
gcgctgggagacttcttccacgaggagcacaaccgtgctgtctgggacgacctgttgagc
gaggtgtcgccgccgccttacgtcgtcgagactaaggaaagcgaagtctcgggcaagacc
gtggtatttaccggcaagctggagacgatgagccgcgacgaagccaaggcacaggccgag
cggctgggcgccaaggctgcgggatcggtatcgccaaagacggacattctggtcgcggga
ccgggggcgggctcgaaattgaagaaggcggccgagttggggattcgggtgctcagcgaa
gaagaatgggccgagatcgttcgcgcggcgggataa
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