Nitratireductor rhodophyticola: T8J41_02415
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Entry
T8J41_02415 CDS
T09622
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh00270
Cysteine and methionine metabolism
nrh00450
Selenocompound metabolism
nrh00670
One carbon pool by folate
nrh01100
Metabolic pathways
nrh01110
Biosynthesis of secondary metabolites
nrh01230
Biosynthesis of amino acids
nrh04980
Cobalamin transport and metabolism
nrh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
T8J41_02415 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
T8J41_02415 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
T8J41_02415 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
T8J41_02415 (metH)
04980 Cobalamin transport and metabolism
T8J41_02415 (metH)
Enzymes [BR:
nrh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
T8J41_02415 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
DUF1129
Motif
Other DBs
NCBI-ProteinID:
WPZ14698
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Position
complement(513336..517118)
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AA seq
1260 aa
AA seq
DB search
MSSIDELFGPVGEKPDGSEIFAALHKAARERILILDGAMGTQIQGLGFDEDHFRGDRFTG
CACHQQGNNDLLNLTQPKAIEEEHFRYAMAGADILETNTFSSTTIAQADYGMEDMVYELN
RDGARLARRAARRAEEKDGVRRFVAGALGPTNRTASISPDVNNPGYRAVTFDDLRIAYGE
QLRGLLDGGTDIVLIETIFDTLNAKAAIFACEEIFAERGIRLPVMISGTITDLSGRTLSG
QTPTAFWHSVRHAKPITIGLNCALGAAAMRPHLAELSGVADTLICAYPNAGLPNAFGQYD
ESPEMMAEQVAEFAREGLINVVGGCCGSTPEHIAAIRDAVANHPPREIPERAPQMRLSGL
EPFTLTDDIPFVNVGERTNVTGSAKFRKLITAGDYATALDVARNQVEGGAQIIDINMDEG
LIDSKKAMIEFLNLVAAEPDIARVPVMIDSSKWEVIEAGLKCVQGKAVVNSISLKEGEEA
FLHQANLCRMYGAAMVVMAFDETGQADTEARKVEICTRAYKLLTEKAGVAPEDIIFDPNV
FAIATGIEEHDNYGVDFIEATREIIRTLPHVHISGGVSNLSFSFRGNEPVREAMHAVFLY
HAIQAGMDMGIVNAGQLAVYDAIDAELREACEDVVLNRTPKAGGTATERMLEIAERFRGT
GGREAKEKDLSWRELPVEKRLEHALVNGITEYIDADTEEARLNAERPLHVIEGPLMAGMN
VVGDLFGSGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRANGGGERESAGKILMATVKGD
VHDIGKNIVGVVLACNNYEIIDLGVMVPAAKILETAREEKVDIIGLSGLITPSLDEMVHV
AAEMEREGFDIPLLIGGATTSRVHTAVKIHPSYDRGQAVHVNDASRAVGVVSNLLSPEAR
DGFVANLREEYRKVTEAHERSERDKQRLPIARARANPHRIDWADYTPPQPAFTGTKVFES
WDLEELARYIDWTPFFQTWELKGRYPKILEDEKQGEAARQLFADAQAMLKKIIDEKWFAP
RAVVGFWPANAVGDDVRLFTDENREEELETFFTLRQQLTKRGGKPNVALADFVAPVDSGK
PDWIGGFVVTAGIEEVAIAERFERANDDYNSILVKALADRFAEAFAERMHEKVRKEFWGY
AGDESYTPEELIAEPYLGIRPAPGYPAQPDHTEKVTLFRLLDAEKNSGVELTESMAMWPG
SSVSGLYLSHPESYYFGVAKVERDQVEDYAARKGMDVAEVERWLGPVLNYLPASYSEAAE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctatcgatgaactgtttggccccgttggcgaaaagccggatggatcggaaatc
ttcgccgcgctgcacaaggcagcgcgcgagcgtatcctcatcctcgacggcgcgatgggc
acgcagattcaggggctcggcttcgacgaggatcatttccgaggcgaccgcttcaccggc
tgcgcctgccaccagcagggcaacaacgacctgctcaacctgacgcagccaaaggcgatc
gaggaagagcatttccgctatgcgatggcgggtgcggacattcttgagacgaacacattc
tcctccacgaccatcgcccaggccgattacggcatggaagacatggtctatgagctgaac
cgcgacggtgcgcgacttgcccgccgcgcggccaggcgcgccgaagaaaaggatggtgtg
cgccgtttcgtggcaggcgcactcgggccgaccaaccgcaccgcctccatttcgccggat
gtgaacaatcccggctaccgcgccgtgaccttcgacgatctgcgcattgcttatggggag
cagttgcgcgggctgctcgacggcggcacggacatcgtgctgatcgaaaccattttcgac
acgctgaacgccaaggcggcgatctttgcctgcgaggaaatcttcgcagagcgtggcatt
cgcctgccggtgatgatctccggcacgatcaccgatctttccggccgcacgctttccggc
cagacgccgacggccttctggcattcggtgcggcacgccaagccgatcaccatcggtctg
aactgcgcgctgggcgctgcggccatgcgcccgcatctggcggagctttcgggcgtggcc
gacacgctgatctgcgcctatccgaatgccggtcttccgaatgccttcggccagtatgac
gaaagcccggagatgatggccgagcaggttgcggaatttgcgcgcgaggggctgatcaac
gtggtcggcggctgctgcggctcgacgccggagcacattgccgcgatccgggatgcggtg
gcgaaccatccgccgcgcgaaattcccgagcgtgcgccgcagatgcgcctttcggggctg
gagcccttcacgctcaccgacgatattcccttcgtcaatgtgggcgagcgcaccaatgtc
acgggctctgcaaaattccgcaagctcatcaccgcgggtgattacgcgaccgctctggat
gtcgcgcgcaaccaggtggaaggcggcgcgcagatcatcgacatcaacatggatgagggc
ctgatcgactccaagaaggcgatgatcgagttcctcaacctggtggcggcggaacccgat
atcgcgcgcgtgccggtgatgatcgactcctccaaatgggaggtgatcgaagcgggcctc
aaatgcgttcagggcaaggccgtggtcaactccatctcgctcaaggaaggcgaggaggcg
ttcctgcatcaggccaatctgtgccgcatgtatggtgcggcgatggtcgtgatggccttt
gacgaaaccggtcaggccgacaccgaggcgcgcaaggtggaaatctgcacccgcgcctac
aagcttctgaccgagaaggccggtgtcgctcccgaagacatcatcttcgatccgaatgtg
tttgcgatcgcgaccggtatcgaggagcacgacaattacggcgtcgacttcatcgaggcg
acgcgcgagatcattcgcaccctgccgcatgtccatatctcgggcggtgtgtcgaacctt
tccttctcgttccgtggcaatgagcccgtgcgcgaggcaatgcacgcggtgttcctctat
cacgccattcaggcgggcatggacatgggcatcgtcaatgccggacagctggccgtctat
gacgccatcgatgccgagctgcgcgaggcctgtgaggacgtggtgctgaaccgcacgccg
aaggccggcggcacggcgacggagcgcatgctggagattgccgagcgctttcgcggcact
ggcgggcgtgaggccaaggagaaggatctctcctggcgtgagctgccggtcgagaagcgg
ctggaacatgcgctggtcaacggcataacggaatatatcgatgcggacaccgaggaagca
cggctgaacgccgagcgtccgctgcacgtgatcgaagggccgctgatggccggcatgaac
gtggtcggcgacctgttcggctcgggcaagatgttcctgccgcaggtggtgaaatcggcg
cgtgtgatgaagcaggccgtggcggttcttcttccctatatggaggaagaaaaacgcgcc
aatggcggcggcgagcgtgagagcgccggcaagatcctgatggccacggtgaagggcgat
gtgcacgacatcggcaagaacattgtcggcgtggttctggcctgcaacaattacgagatc
atcgatcttggcgtgatggtgccggcggcgaagatccttgagaccgcccgcgaagagaag
gtcgacatcatcggtctgtccggtctcatcaccccctcgcttgacgagatggtgcatgtg
gcggccgaaatggagcgcgaagggttcgacattccgcttctgatcggtggcgcgacgacc
agccgtgtgcacacggcggtgaagatccatccgagctacgatcgcgggcaggcggttcac
gtgaacgatgcgagccgtgccgtgggcgtggtctcgaacctgctttcgccggaagcgcgt
gacggttttgttgcaaatctgcgcgaggaatatcgcaaggtcacggaagcgcatgaacgc
tctgagcgtgacaagcagcgtctgccgatcgccagggcgcgcgccaacccgcaccggatc
gactgggcggattacacaccgccgcagcccgccttcaccggcacgaaagtgttcgagagc
tgggatcttgaggaactggcgcgctatatcgactggacgccgttcttccagacctgggaa
ttgaaggggcgttatccgaagattctcgaggacgagaagcagggcgaggccgcgcggcag
ctctttgccgatgcgcaggccatgctgaagaagatcatcgacgagaagtggttcgcaccg
cgcgcggtggtgggcttctggccggccaatgcggttggcgacgatgtgcggctcttcacg
gatgaaaaccgcgaagaagagcttgagaccttcttcaccctgcgccagcagcttaccaag
cgtggcggcaagccgaatgtcgccctggcggacttcgttgcgccggtggacagcggcaag
ccggactggatcggcgggttcgtggtaacggcgggcatcgaggaagtggcgattgccgag
cgcttcgagcgggcaaatgacgactacaactcgatcctcgtaaaggcgctggccgaccgg
tttgcggaagcctttgccgagcgcatgcatgagaaggtgcgcaaggagttctggggctat
gcgggcgatgaaagctatacgcccgaagagctgatcgccgaaccctatctcggtatccgt
ccggctccgggctacccggcacagcccgaccacaccgagaaggtgacgctgttcaggctt
ctggatgcggagaaaaattcgggtgtggaactgaccgaaagcatggccatgtggccgggc
tcctcggtttcgggcctctacctttcgcatcccgaaagctattatttcggcgttgccaag
gtcgagcgcgaccaggtggaagactacgcggcgcgcaagggcatggacgtggcggaggtg
gagcgctggctcgggccggtgctcaactatctgccggcctcctactcggaagccgccgaa
tag
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