Nitratireductor rhodophyticola: T8J41_21740
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Entry
T8J41_21740 CDS
T09622
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nrh
Nitratireductor rhodophyticola
Pathway
nrh01501
beta-Lactam resistance
nrh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nrh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T8J41_21740
01503 Cationic antimicrobial peptide (CAMP) resistance
T8J41_21740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrh02000
]
T8J41_21740
01504 Antimicrobial resistance genes [BR:
nrh01504
]
T8J41_21740
Transporters [BR:
nrh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T8J41_21740
Antimicrobial resistance genes [BR:
nrh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
T8J41_21740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
FKS1_dom2
Motif
Other DBs
NCBI-ProteinID:
WPZ16790
LinkDB
All DBs
Position
unnamed02:complement(134753..137839)
Genome browser
AA seq
1028 aa
AA seq
DB search
MSFSDIFIRRPVLSTVLGLLILLLGFQGLFNLQVRQYPEVEETVITVTTIYPGASADLIQ
GFITAPIARAVATTENVDYVTSQSRPSASTVSVQMRLGSDPDVALTEVMSKVQQVRSELP
ADAKDPTIVKGTGMQFATMYLAMQNPNMSSEQLTEYIERVIRPRMSTIPGVAEVQIIGAA
NYSMRVWIDPVRLAARQLTAAEVLAGIKASNFLAAPGKTENEYVAYAISMESTLQTPEAF
GALPLKATGDDVVRLRDVADIELAAESTDMVVSFNGQPGTFIGVFPTPGANPLDMAGAVT
EELPSIQSSLPEGMSIEVLYDATESISASIDEVFKTIMEAVLIVIVIILLFLGSFRSVLM
PIVTIPLSLIGVCFVLFALGYSINLLSLLAMVLAIGLVVDDAIVVVENIHRHIEEGLSPR
RAAFVGMKEITGPVVAMTITLAAVFAPLAFTGGLTGSLFREFAMTLAGAVVISGVVALTI
TPMMSARILKRGNHSRFQVIVDTTFERLANFYERMVSGSLKYRPVTMLVVLVLLGLTGFM
FMNTSSELAPEEDEGALFSLITAPSYATADYTTLYTTQMRELTKDLPELKASFSIVGFGG
QTNSGIALWAFKDWADRERSQKEIQQDIQARLSKIAGVEALVFAPPSLPGAGGGLPISLV
IQSTSDSARVFEVAEKIKEEAQASGRFIVVQNSLAYNAQQVVVTVDRDRAAALNLPVSDV
GTTLSLLVGSGSIAQFDRDSNSYDIIMQVPQEYRENPERLGDFFVRSATGEMVPLSAVIT
VSTDVSAAAIEQFNQLNSATISALPVPGVSTGDGLAVIEDIARSTIPDGFFIEYSGQSRL
EVEQGNTILIAFTLAVVVIYLVLAAQFESFRDPLIIMMTVPLSIFGAILPLNLGLSTLNI
YTQVGLITLIGLITKHGILMVEFANQQREEHGLSRVEAIVASAKVRLRPILMTTAAMALG
VVPLIMAAGAGAAARYSMGLVIFTGLIIGTTFTLFVVPMFYTFIAKARLVTEEDDHPNEQ
AQPAPAAE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgatatcttcatccgcaggccggtcctttcgaccgtcctcggactgctg
atcctgctgcttggcttccagggactgttcaacctgcaggttcgtcagtatccggaggtc
gaggagacggtgatcaccgtcaccacgatctatcccggcgccagtgccgatctgatccaa
ggttttatcaccgcgcccatcgcacgggcggtggcgacgaccgagaacgtggattacgtc
acgtcgcagagccgtccttcggcgagcacggtcagcgtgcagatgcggcttggctcggac
cccgacgtcgcgctgacggaggtcatgtcgaaggtgcagcaggtgcgcagtgaactgcct
gcggacgccaaggacccgaccatcgtcaagggcacgggcatgcagttcgccaccatgtat
ctggcgatgcagaacccgaacatgtcgagcgaacagctcaccgaatacatcgaacgcgtt
atccgcccgcgcatgtcgaccatccccggcgttgccgaggtgcagatcatcggtgcagcg
aactattcgatgcgcgtgtggatcgaccccgtgcggctggcggcacgccagctcaccgcg
gccgaggtcttagccggcatcaaggcatcgaacttccttgccgcacccggcaagaccgaa
aacgaatatgtcgcctacgcgatctcgatggagtccacgctgcagacgccggaagcgttt
ggagctctgccgctcaaggcaacgggcgacgatgtggtgcgtctgcgtgacgtggccgat
atcgagcttgccgccgagagcacggatatggtggtgagcttcaacggtcagccgggcacg
ttcatcggcgtcttcccgacgccgggcgccaacccgctcgacatggcgggtgccgtaacg
gaggagctgccgtcgatccagtcgagcctgcctgaaggcatgagcatcgaggttctttac
gacgcgacagaatccatcagcgcctccattgacgaggtcttcaagaccatcatggaagcg
gtgctgatcgttatcgtcatcatcctcctgttccttggctccttccgctcggtgctgatg
ccgatcgtgacgattccgctttcgctcatcggcgtctgcttcgtgctgttcgcgctcggc
tattcgatcaacctcctgtcgctgctggccatggtgctggccatcggccttgtggtggac
gacgccatcgtcgtggtggagaacattcaccggcatatcgaagaagggctctcgccgcgc
cgcgcggcctttgtcggcatgaaggaaatcaccggcccggttgtcgccatgacgatcacg
cttgctgcggtgttcgcgcctctggctttcaccggcggtctgaccggctcgctgttccgc
gagtttgcgatgacgctcgccggtgccgtggtgatttccggtgtcgtcgcgcttacgatc
acgccgatgatgtcggcgcgcattctcaagcgcggcaatcacagccggttccaggtgatt
gtcgacaccacgttcgaaaggctcgccaatttctatgaacggatggtcagcggttcgctc
aaataccgccccgtcacgatgctggtggtgctcgtccttctcggacttaccggcttcatg
ttcatgaacacgtccagcgagctggcaccggaggaagacgagggcgcactgttctcgctg
atcaccgcgccttcgtatgcgacggccgactacaccaccctctacacgacgcagatgcgt
gaactgaccaaggatctgcccgagctcaaggccagcttctccatcgtcggttttggtggg
cagaccaattcgggcatcgcgctctgggccttcaaggactgggcggatcgcgagcggtcg
cagaaggaaatccagcaggatatccaggcacggctctccaagatcgccggtgtcgaggcc
ctcgtcttcgccccgccttcgcttcccggcgccggcggtggtctgccgatctcgctcgtg
atccagtcgacaagcgattcggcgcgcgtcttcgaagtggccgagaagatcaaggaagag
gcgcaggcctcgggccgcttcatcgtcgtgcagaactcgctcgcttacaacgcgcagcag
gttgtggtgacggtggaccgtgaccgggcggcggcgttgaacctgccggtttccgatgtc
ggcacgacactcagcctgcttgtcggcagcggttcaatcgcgcagttcgaccgcgattca
aacagctacgacatcatcatgcaggtgccgcaggaataccgcgagaatccggagcggctg
ggcgacttcttcgtgcgcagcgcgacgggcgagatggttccgctctcggcggtcatcacc
gtatcgacggatgtttcggcggcggccatcgagcagttcaaccagttgaactcggcaacg
atctcggccctgccggtgcccggtgtttcgaccggtgacggcctcgcggtgatcgaggac
atcgccaggagcaccatcccggacggcttcttcatcgagtattccggccagtcgcggctt
gaagtggagcagggcaacaccatcctgatcgccttcacgctcgccgtggtggtgatctat
ctggtgcttgcggcgcagttcgagagcttccgcgatccgctcatcatcatgatgacggtg
ccgctgtcgatcttcggcgccattctgccgctcaatctgggactgtcgacgctgaacatc
tacacccaggtgggcctgatcacgctcataggcctgatcaccaagcacggcatcctgatg
gtggagttcgccaaccagcagcgtgaggagcatggcctgtcgcgcgtcgaggccatcgtc
gcatcggccaaggtgcgcctgcgcccgatcctcatgaccacggccgccatggcgctcggc
gtcgtgccgctgatcatggctgcaggtgcgggtgccgcggcgcgctactcgatgggtctc
gtcatcttcaccggcctgatcatcggcaccaccttcacccttttcgtggtcccgatgttc
tacaccttcatcgccaaggcgagactggtgaccgaggaagacgaccacccaaacgaacag
gcgcagcccgcgccggccgctgaatag
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