Nocardioides renjunii: SHK17_09985
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Entry
SHK17_09985 CDS
T10238
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
nrn Nocardioides renjunii
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nrn03051
]
SHK17_09985 (dop)
Enzymes [BR:
nrn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
SHK17_09985 (dop)
Proteasome [BR:
nrn03051
]
Prokaryotic proteasome
Bacterial regulatory particles
SHK17_09985 (dop)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WQQ24300
LinkDB
All DBs
Position
2098544..2100064
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AA seq
506 aa
AA seq
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MSVRRVMGTEVEYGISVQGQPSANPMVASSQIVNAYASSTARARRARWDFEEESPLRDAR
GFDMARQVADPSQLTDEDLGLANVILTNGARLYVDHAHPEYSSPEVTTPLDVVRWEKAGE
QVMLDASRMAAQVPGSTPILLYKNNTDNKGASYGAHENYLMRRSTQFAEIVRHLTPFFVS
RQVVTGAGRVGIGQDGRDTTPEQGFQISQRSDYFEVEVGLETTLKRPIINTRDEPHADPA
VYRRLHVILGDANLAEISIYLKAGTTALVLAMIEDGFIDRDLSVEGAVRALRDVSHDPTL
KHLVTLRDGRRLTAVQLQLEYLELARKYVEDRYGADADEQTVDVLARWESVLTRLERDPM
ECAGELDWVAKLKLLNQYRDRDRLDWDDAKLHLIDLQYADVRPDKGLYHRLAGAGRITRL
LDDATIEAAMHDPPVDTRAYFRGRCLDKYADSVAAASWDSVIFDLPGRESLQRVPTIDPL
RGTRAHVGELIDRSDTAQALVAAITR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtacgacgcgtgatgggcacggaggtcgagtacggcatctcggtgcagggccaa
ccgtcggccaacccgatggtcgcctcctcgcagatcgtcaacgcgtacgcctcgtcgacg
gcgcgggcgcgacgggcccgctgggacttcgaggaggagtcgccgctgcgcgacgcccgc
ggcttcgacatggcgcgccaggtcgcggaccccagccagctcaccgacgaggacctcggc
ctggccaacgtcatcctcaccaacggcgcccggctctacgtcgaccacgcccacccggag
tactcctcgccggaggtcaccaccccgctcgacgtggtgcggtgggagaaggcgggggag
caggtcatgctcgacgcctcgcggatggccgcgcaggtccccggcagcacgccgatcctg
ctctacaagaacaacaccgacaacaagggcgcctcctacggcgcccacgagaactacctg
atgcgccgctcgacgcagttcgccgagatcgtgcggcacctcaccccgttcttcgtctcg
cgccaggtggtcaccggcgccgggcgggtcggcatcgggcaggacgggcgcgacaccacg
ccggagcagggcttccagatcagccagcgctcggactacttcgaggtcgaggtcggcctc
gagaccacgctcaagcgcccgatcatcaacacccgcgacgagccgcacgccgaccccgcg
gtctaccgccgcctgcacgtcatcctcggcgacgccaacctcgccgagatctccatctac
ctcaaggccggcacgacggcactcgtcctggcgatgatcgaggacggcttcatcgaccgc
gacctcagcgtcgagggggcggtccgggcgctgcgcgacgtctcccacgacccgacgctc
aagcacctcgtgacgctgcgcgacgggcggcggctcaccgcggtccagctgcagctggag
tacctcgagctggcccgcaagtacgtcgaggaccgctacggcgccgacgccgacgagcag
accgtcgacgtgctggcgcgctgggagtcggtgctgacccgcctcgagcgtgacccgatg
gagtgcgccggcgagctcgactgggtcgccaagctcaagctcctcaaccagtaccgcgac
cgcgaccggctcgactgggacgacgccaagctgcacctcatcgacctgcagtacgccgac
gtacggcccgacaaggggctctaccaccggctcgccggcgccgggcggatcacccgcctg
ctcgacgacgccaccatcgaggcagccatgcacgacccgccggtcgacacccgcgcctac
ttccgcgggcgctgcctcgacaagtacgccgactcggtggccgcggcgtcgtgggactcg
gtcatcttcgacctcccgggccgcgagtcgctccagcgcgtgcccacgatcgaccccctc
cgcggcacccgggcccacgtcggcgagctgatcgaccgcagcgacaccgcccaggcgctc
gtcgcggcgatcacgcgctga
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