Nocardioides renjunii: SHK17_11135
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Entry
SHK17_11135 CDS
T10238
Name
(GenBank) biotin/lipoyl-binding protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nrn Nocardioides renjunii
Pathway
nrn01501
beta-Lactam resistance
nrn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SHK17_11135
01503 Cationic antimicrobial peptide (CAMP) resistance
SHK17_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nrn03036
]
SHK17_11135
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrn02000
]
SHK17_11135
01504 Antimicrobial resistance genes [BR:
nrn01504
]
SHK17_11135
Chromosome and associated proteins [BR:
nrn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SHK17_11135
Transporters [BR:
nrn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SHK17_11135
Antimicrobial resistance genes [BR:
nrn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SHK17_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
CzcB_C
BSH_YknX
Biotin_lipoyl
Peptidase_M23
Beta-barrel_YknX
Beta-barrel_AprE
ATP-synt_ab_Xtn
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
WQQ20462
LinkDB
All DBs
Position
complement(2357145..2358794)
Genome browser
AA seq
549 aa
AA seq
DB search
MIINGLLVLLLIAAAGGAYLLLDEEESAAAPATTEVTRGNVVSMVSATGNVVAARDVGVD
FDAGGKLATVSVKVGERVEAGDVLARIENTDAIDQRDSAQATYDQAVAGLRQLTQGPTDA
DLAAGNASVRQAGASVDSAEQALADSRRVARTNRRVYDEQVRVARRDVSRAQDDRADARG
ALTSARTALQEAQQLEASACASSPDGTTGPATAVCSNAQSAVEANEQRITSAETSLSTAE
ASVDSAQDGLRTAEQNRSVGSAQQAQSVGSAESSLRSARASYSYTVASARQQTQPATDGE
VESAQAQVASAEVTLRTAQRAVADTVLRAPAAGIVASISGSVGEYVGGSGSGGTTTGSTT
TGTTTETSVDASGFVVLTGVDGLQVQADFSEADVSQLSLGRGASVNFEALDNAGVASGTN
AEVTSIAPTSVVTDNVVTYEVFATLNAPPERLKVGQTATLDVVLAEAEDVLQVPSSAIET
TGESSTVTVLVDGEEKQREVETGVVGDSTTEILSGLDEGDLVVTSSGGGGLTGFPGGELP
ELPGGGGLG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatcaacggcctgctggtgctccttctcatcgccgctgcaggaggcgcctacctc
ctcctcgacgaagaggagagcgcggcggcgcccgccacgactgaagtgacgcgcggcaac
gtcgtgtcgatggtgtccgctactggcaatgtcgtcgccgcccgcgacgtgggtgtcgac
ttcgacgccggagggaagctcgcaacggtgtccgtcaaggtgggcgaacgcgtcgaggcc
ggcgacgtcctggccaggatcgagaacaccgacgcgatcgaccagcgcgacagcgctcag
gcgacgtacgaccaggcagtcgccggcctgcgtcagctgacccagggcccgaccgatgcg
gacctggctgccggcaacgcgtcggtccgccaggccggggcgtcggtggacagcgcagaa
caggcactcgcagactccagacgggtcgcccgtaccaatcgtcgggtgtacgacgaacag
gtcagggtggcgcgacgggacgtgagccgagcacaggacgaccgtgccgacgcccgcgga
gccctcacctcggctcggacggcgttgcaggaggctcagcagctcgaggcgagcgcgtgc
gcgtcgtcccccgatgggaccacaggacccgcaaccgccgtgtgcagcaacgcacagagc
gcggtcgaggcgaacgagcagaggatcacctcggcggagacgtcgttgagcaccgccgaa
gcatcggtcgacagtgcgcaggacgggttgcggacggcggagcagaaccggtcggtgggc
tccgcgcaacaggcgcagtccgtcggatcggccgagtcgtcactgaggtcggcacgagcc
tcctactcctacacggtcgcatcagccagacagcagacgcagccggcgacggacggcgag
gtcgagtcagcgcaggcccaggtcgcatccgccgaagtcaccctccggacggcacaacga
gccgtcgccgacactgttctccgtgctcctgccgccggcatcgtcgcctcgatctcgggg
agcgtaggtgagtacgtcggaggttccggctccggggggactaccaccggctcgacgacc
accggcaccacgacggagacgtccgtggacgcgtccgggttcgtggtgctgaccggcgtc
gacgggttgcaggtgcaggcggacttcagtgaggccgacgtgtcccagctgtccctcggt
cgaggagcgagcgtcaacttcgaggcgctcgacaacgcgggtgtcgcgagcggcacgaac
gcagaagtgaccagcatcgcgcccacgtccgtggtcacggacaatgtcgtgacgtacgag
gtgttcgcgaccttgaacgctcctccagagcgcctcaaggtcggccagacggccacgttg
gacgtcgtgctcgccgaggcggaggatgtgctccaggtgccttcctcggcgatcgagacc
acgggggagagctccaccgtcaccgtcctcgtcgacggtgaggaaaagcagcgcgaggtc
gagaccggcgtcgtgggcgactcgaccaccgagatcctgtccggtctcgacgagggtgac
ctggtggtcacgagcagcggcggtggcggcctcacaggtttccccggtggcgagctgccc
gagctgcctggtggcggtggtctcggatga
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