Nocardioides renjunii: SHK17_13085
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Entry
SHK17_13085 CDS
T10238
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00300
Lysine biosynthesis
nrn00550
Peptidoglycan biosynthesis
nrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHK17_13085
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHK17_13085
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
SHK17_13085
Enzymes [BR:
nrn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SHK17_13085
Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
Precursor biosynthesis
Amino acid ligase
SHK17_13085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
LpxD
iSirtuin
DUF1611
Motif
Other DBs
NCBI-ProteinID:
WQQ24444
LinkDB
All DBs
Position
complement(2742559..2744025)
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AA seq
488 aa
AA seq
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MAETTEVAAHGDLDVPVSGISLSTARVRPGDLYAALPGARAHGADYAAEALSAGAVAVLT
DRAGLDLLPPGTPALVVPEPRRVLGRLAARLYGEPATDLRVIGVTGTQGKTTTTRILEQG
LTASGVTSAVIGTVGTRIAGEDVQTQLTTPEAPDLHGLFAVMRERGVDTCAMEVSSHALV
MGRVDGVVFDVAAFLNLGRDHLDFHRDVDDYFAAKASLFTPERAAQGLTNLDDEHGRRLL
DVATIPMSTFSTEGRDADWRAVDVALAPSGATFTVVGPGVTVPAAVRVPGAFNVSNALAA
IASAALAGLDPRTVADGIARVGGVPGRLERVAAGQDWAVVVDYAHKPDALEAVLATLRPL
TEGRVIVVVGAGGDRDRVKRPVMGEIAARLADVVVVTDDNPRTEDPADIRAAVLEGTRGG
AAEVLEVGDRRLAIREALRRAAPGDVVLVAGKGHETGQQVGSEVHPFDDRVVAAEEIRAL
LTAAGEPA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atcgccgagacgaccgaggtggccgcccacggcgacctcgacgtgccggtctccgggatc
tcgctcagcaccgcccgcgtccggcccggtgacctgtacgccgccctcccgggcgcccgc
gcccacggtgcggactacgccgccgaggcgctgtccgcgggcgccgtggccgtcctcacc
gaccgcgcggggctcgacctgctcccgccgggcacgcccgcgctcgtcgtacccgagccg
aggcgggtgctcggtcgcctggccgcccggctctacggcgagcccgcgacggacctgcgg
gtcatcggcgtcaccggcacgcagggcaagaccaccacgacccgtatcctcgagcagggg
ctgaccgcgtccggcgtgacgtccgcggtgatcggcaccgtcggcacccgcatcgccggc
gaggacgtgcagacccagctgacgacgcccgaggcgcccgacctgcacggcctgttcgcg
gtgatgcgcgagcggggcgtcgacacctgcgccatggaggtctccagccacgcgctcgtg
atgggccgcgtggacggcgtggtgttcgacgtcgccgccttcctcaacctgggccgtgac
cacctcgacttccaccgcgacgtcgacgactacttcgccgccaaggcgagcctgttcacc
ccggagcgcgctgcacagggcctgaccaacctcgacgacgagcacggccggcggctgctg
gacgtggcgacgatcccgatgtcgaccttctccaccgagggccgcgacgcggactggcgg
gcggtcgacgtcgcgctggcgccgtcgggggcgaccttcaccgtcgtcggccccggcgtc
acggtgccggcggcggtccgcgtcccgggcgccttcaacgtgtccaacgcgctggcggcg
atcgcctcggccgccctcgccgggctcgacccgcggacggtcgccgacggcatcgcacgc
gtcggcggtgtgccgggccggctggagcgggtcgcggcgggccaggactgggcggtggtc
gtcgactacgcccacaagccggacgccctcgaggcggtgctggccacgctgcggcccctc
accgagggccgggtgatcgtcgtggtcggcgcgggcggcgaccgcgaccgggtcaagcga
ccggtgatgggggagatcgccgcgcggctggccgacgtcgtggtcgtcaccgacgacaac
ccgcgcaccgaggaccccgccgacatccgcgcggccgtgctcgagggcacccgcggcggt
gccgcggaggtcctcgaggtcggtgaccgccggctggcgatccgcgaggcactgcgacgc
gccgcccccggcgacgtggtcctcgtcgcgggcaaggggcacgagaccggccagcaggtc
ggcagcgaggtgcatcccttcgacgaccgcgtcgtcgccgccgaggagatccgggcgctg
ctgaccgccgccggggagcccgcatga
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