Nocardioides renjunii: SHK17_15920
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Entry
SHK17_15920 CDS
T10238
Name
(GenBank) M15 family metallopeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00550
Peptidoglycan biosynthesis
nrn01100
Metabolic pathways
nrn01502
Vancomycin resistance
nrn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHK17_15920
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SHK17_15920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SHK17_15920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nrn01002
]
SHK17_15920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
SHK17_15920
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
nrn01504
]
SHK17_15920
Enzymes [BR:
nrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
SHK17_15920
Peptidases and inhibitors [BR:
nrn01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SHK17_15920
Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SHK17_15920
Antimicrobial resistance genes [BR:
nrn01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SHK17_15920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
NeuB
DUF7537
Motif
Other DBs
NCBI-ProteinID:
WQQ21373
LinkDB
All DBs
Position
complement(3332651..3333427)
Genome browser
AA seq
258 aa
AA seq
DB search
MGHRAAGIVVAVVVTALMVGCSAGADTTAPARSAPGEQAGEQAGEPAGGGAPAADPAPLR
QPDPFDLTRHSIDDPRSPWVVVNQRRPLRPATHRPELAVVEGYLVHPRVVRPLAALLGAG
RRAGLDLRVMSAYRSHGRQAQLYAGAVAARGAERAARTTAPAGHSEHQTGLAVDLGRAST
GACNVEACFARTREARWLRRHAHRFGFVLRYPAGGQRMTGYAHESWHFRHVGRPLATHLR
HERIPTLEEAFGLVGAGS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgggccaccgcgccgccggcatcgtcgtcgcggtggtcgtgacggcgctgatggtgggc
tgctcggccggcgccgacaccaccgcgccggcgcggtcggcgcccggcgagcaggccggc
gagcaggccggcgagccggccggtggcggcgcccctgcggccgacccggcgccactgcgg
cagcccgaccccttcgacctcacgcgccactcgatcgacgacccccgcagcccctgggtc
gtggtcaaccagcggcgccccctgcgcccggccacgcaccggcccgagctggcggtcgtc
gagggctacctcgtccacccgcgcgtcgtacgtccgctcgccgcgctgctcggcgccggc
cgtcgcgccgggctggacctgcgcgtgatgagtgcctaccggtcccacggacgccaagct
cagctgtacgccggcgcggtggccgcccgcggggccgagcgggccgcgcggaccacggcg
cccgccggccactccgagcaccagaccggcctcgccgtcgacctgggccgggcctcgacg
ggcgcgtgcaacgtcgaggcgtgcttcgcgaggacgcgcgaggcccgctggctgcggcgc
cacgcgcaccggttcggcttcgtcctgcgctacccggccgggggtcagcggatgaccggc
tacgcccacgagagctggcacttccgtcacgtcggccggccgctcgccacccacctgcgt
cacgagcggatcccgacgctggaggaggcgttcggccttgtcggagccggctcctag
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