Neisseria sicca: J7445_06950
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Entry
J7445_06950 CDS
T07263
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nsc
Neisseria sicca
Pathway
nsc03030
DNA replication
nsc03410
Base excision repair
nsc03420
Nucleotide excision repair
nsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J7445_06950 (ligA)
03410 Base excision repair
J7445_06950 (ligA)
03420 Nucleotide excision repair
J7445_06950 (ligA)
03430 Mismatch repair
J7445_06950 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsc03032
]
J7445_06950 (ligA)
03400 DNA repair and recombination proteins [BR:
nsc03400
]
J7445_06950 (ligA)
Enzymes [BR:
nsc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
J7445_06950 (ligA)
DNA replication proteins [BR:
nsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J7445_06950 (ligA)
DNA repair and recombination proteins [BR:
nsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
J7445_06950 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J7445_06950 (ligA)
MMR (mismatch excision repair)
DNA ligase
J7445_06950 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J7445_06950 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QTM22293
LinkDB
All DBs
Position
1475077..1477548
Genome browser
AA seq
823 aa
AA seq
DB search
MNQTAQHIRHLTNLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNYPELKLPDSPTQ
RVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVI
EPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNVKTVANIPLRLHGENTPELIEVRG
EVLMLKADFAALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQG
GFVAEEHIQELAYFQELGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKV
NSLAQQRELGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGV
TVTNATLHNQDELSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDDLKHQ
QDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQG
LIHFASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKGSSENENG
DAETVSDDLSESNTQNSKKQPTKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTL
AQAFGSLEHVRRAPEPILACLPDIGTVVACSIAHFFAQDAQQAMIDELLAAGVAPQTQAV
TIPPARHAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKALPADWQTWRSEPQN
AALLENLKTFFARTSSENQEATVSDDLNEAVAGKTFVLTGTLPTLKRDQAQALIEAAGGK
VSGSVSKKTDYVVAGEAAGSKLEKANALGVAVLSEEELLAMLD
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaccgcacaacacatccgccacctcaccaacctcctcaaccgctacgcctac
gaatactacactctcgacgcgcccagcgtacccgatgccgaatacgacaaattgttccgc
gaactcgaagcgttggaacgaaactatcccgagctcaaactgcccgacagcccgacccag
cgcgtcggtggtgagcctttggcgggatttgctgaagtgcgccacgaagtgccgatgctg
tcgctgaccaacgccttctccccgcaagatgaaaacggcgtgttcgaccatgccgaaatg
tacgccttcgaccaacgcgtgcgcgacggcttggacggcggtaatcccgaatacgttatc
gaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattggtacag
gcagcaacacgcggcgacggcacgacgggcgaagacgtgacccaaaacgtcaaaaccgtc
gccaacatccccttgcggctgcacggcgaaaatacgcccgaactcatcgaagtgcgcggc
gaagtgctgatgctcaaagccgatttcgccgccctcaataaaagacaagccgaaaacggg
caaaaaccctttgccaatccgcgcaacgccgccgccggcagcctgcgccaactcgattct
cgtattaccgcgcagcgcaaactgcactttttcccctactccgtcgcccgccagcaaggc
ggtttcgtcgcggaagaacacatccaagaactcgcctatttccaagagctcggtttcagc
ctgcctaacggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttttacgaa
caaatgcagcaaaaacgccctgagctgccctacgaaatcgacggcatggtcgtcaaagtc
aacagcttggcgcaacaacgcgaactcggcttcatctcccgcgcgccgcgctgggcgatt
gcccacaaattccccgccgaagaagccctaaccatcgttgaagccatcgatgtgcaaatc
gggcgcaccggagccgttacccccgtcgcccgcctgcaacccgtattcgtcggcggcgta
accgtaaccaacgccaccctgcacaatcaggacgaattatcgcgcaaagacgtgcgcgtc
ggagataccgtcgtcgtgcgccgcgccggagatgtgattcccgaagtcgtgcgcgtgatt
ttcgaacgccgcccgatgcaggaaaccgccgttgccgtttcagacgacctcaagcatcag
caagacgacctgtttgccgaaacaccgtccgcaaaccaaacccaatccgttccgctccac
aagccctaccgcctgccgacccattgccccatctgccgcagcgaaatcgaacgtgaagaa
ggcgaagccgtcgcccgatgcagcggcggcatgctttgtcaggcacaacgcgcgcaaggt
ttaatccacttcgcctcgcgcaaagccatggacatcgacggactcggtcaaaaacaaatc
gagcagcttgtcgcccaagacctcgtccgccacttcgccgacctctaccgcctcgacatc
ccgaccttgcaaaaaatgaaggaaacggcagataaagggtcgtctgaaaacgaaaacggc
gacgccgaaacggtttcagacgacctgtctgaatcaaacacccaaaacagcaaaaaacaa
ccaaccaagtgggcggaaaacatcctcgcaggcatagaagccagcaaaacgcccgaactc
gcccgcttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctg
gcgcaggcattcggctcattggaacacgtccgccgcgcacccgaacccatcctcgcctgc
ctgcccgacatcggcaccgtcgtcgcctgctccatcgcccacttcttcgcccaagacgcg
caacaggcgatgatagacgagctgctcgccgcaggcgttgccccgcaaacccaagccgtt
accatcccgcctgcccgccacgccgagccgcaacgctggattgcccgcctgcccggtttc
aaaatcagcgaaaacaaagcccaagccttatgggaactcgccggcaaaagcatagagggc
ctgcaaaccgacaaagccctccccgccgactggcaaacatggcgcagcgaaccacaaaac
gccgccctgctcgaaaacctgaaaactttcttcgcccgaacgtcgtctgaaaaccaagaa
gcaacggtttcagacgacctcaatgaagccgtagcaggcaaaaccttcgtgttaaccggt
accctgcccaccctcaaacgcgaccaagcccaagccttgatcgaagccgcaggcggtaaa
gtttccggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaagccgccggcagc
aagctggaaaaagccaatgccttgggtgtcgcagtattgagcgaagaagaacttttggcg
atgctggactga
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