Ehrlichia sennetsu: NSE_0500
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Entry
NSE_0500 CDS
T00329
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nse
Ehrlichia sennetsu
Pathway
nse03030
DNA replication
nse03410
Base excision repair
nse03420
Nucleotide excision repair
nse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSE_0500 (ligA)
03410 Base excision repair
NSE_0500 (ligA)
03420 Nucleotide excision repair
NSE_0500 (ligA)
03430 Mismatch repair
NSE_0500 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nse03032
]
NSE_0500 (ligA)
03400 DNA repair and recombination proteins [BR:
nse03400
]
NSE_0500 (ligA)
Enzymes [BR:
nse01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NSE_0500 (ligA)
DNA replication proteins [BR:
nse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NSE_0500 (ligA)
DNA repair and recombination proteins [BR:
nse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NSE_0500 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NSE_0500 (ligA)
MMR (mismatch excision repair)
DNA ligase
NSE_0500 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NSE_0500 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
BRCT_2
PTCB-BRCT
HHH_5
5_3_exonuc
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
ABD46192
UniProt:
Q2GDR2
LinkDB
All DBs
Position
complement(420546..422558)
Genome browser
AA seq
670 aa
AA seq
DB search
MEAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSLGFPVVVGYP
ASEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFSARY
VNGKLVSCATRGDGKIGENIIDNMKVINGFPIEIMDVPDLLEVRGEVFLDHDTFQTLEGF
SNPRNAAAGSLRQLNPEITNERNLQYFAYSASKIDGIEHQEDVLHFLSGRGFMTNPLRLA
SSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGTLSDAPRWAIAHKFPSHR
AKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNEDELERKDIREGDLVIVER
AGDVIPKVLEVDISYRTNQERFIFPDKCPSCSSTLIRKNNEAATRCNNSKKCPEQVIQQI
KHLVSAQAFDIDGIGTSHISFFIEKGFISEPADIFRLDKHRDEIKKYDGWGEKSVENILK
NIKNSRKISLEKFIFSLGIKNIGEKTAYMLAQQFKSFANWFDKMSMLKDDTQTEDEIRNL
DGMGSCICESLLDFFSDSDNCNMVKSLSNHVMITDHTVNIGGSLSGKKFVFTGTLLSITR
EEAKEIIKKAGGIVVNSISKQIDYVVAGEKAGSKLAKANELGIAIIEEKTLIEFTNGNNT
PALKKETSSN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaagaaggaaattcaagagctttacgagaagctcctacgacacaataagaag
tactatcaagatgatagtccagagataacagatgctgaatatgactcgattaaggaccgt
taccttaagcttctggaagcaaatccgagtctaggctttccggtagttgttggctaccct
gcttctgagaagtttcaaaaagtcaaacacctgtctcctatgctttcattacgcaacatc
ttctcggaagaagaactggtagagtatatcgaaaaaacaaaaagattccttaatctgaaa
agtgcacttgaattcctgtgtgaacccaaaatagatggtgtgtcattttctgcacgttat
gtcaacggaaaactagtctcttgtgcaacaagaggagatgggaaaataggagaaaacatt
attgataacatgaaagttatcaatggtttccccatagaaattatggatgtaccagatctt
ttggaagtacgtggagaagttttccttgaccatgatacttttcaaactcttgaaggcttt
tcaaatcctcggaatgctgctgcggggtcgcttaggcaacttaatcctgaaataacaaat
gaacgcaatctgcaatacttcgcttatagcgcgagcaaaatcgatggaatagaacatcaa
gaagatgtgttacactttctcagtgggcgtggttttatgacaaatccgttgagactagct
tcgtcaaaagttcctgaaatcatgagcttttacgattctgtttatcgtagacgctcgcaa
atcaagtacgatatagatgggctggtctacaaggtgaatgatctcaagttacatgcgagg
ctgggtacactatcagatgcacctagatgggccatagcgcataaatttccctcacatcga
gcaaagactatacttgaaaaaattaagctcagcgttgggcgtacaggtatcatcacgcca
gttgctcacttaaaaccaattaccataggcggagtcgttatatcaagggcgagcttatat
aacgaagacgaactagagagaaaagatatccgcgaaggagatctggtaatagtagaaaga
gctggagatgtaattccaaaagtgcttgaagtagacatctcgtatagaactaatcaggag
aggtttatctttcctgataaatgtccatcctgttcttctacactgataagaaaaaataac
gaagcggcgactcgatgcaataatagcaaaaaatgccccgaacaggtaatacaacaaata
aaacatcttgtctcagcgcaagcgttcgatatagatggtattgggacatcacacatctct
ttttttattgagaagggatttatttcagaaccagcagatatttttcgcttagataagcac
agagatgagatcaaaaaatatgatggttggggagagaaatcagtagagaatattcttaaa
aatattaaaaactctcggaaaataagtttggaaaaatttatttttagccttggaataaaa
aatataggcgaaaagactgcttacatgcttgcacaacagttcaaaagttttgccaactgg
tttgacaaaatgtccatgctcaaagacgatactcaaactgaggatgaaattaggaatctc
gatggtatgggaagttgtatctgtgaatctttactggattttttcagtgattcagataat
tgcaatatggtaaaaagtttatccaatcacgtcatgattactgatcacactgttaatata
ggtggctcacttagcgggaaaaaattcgtttttacaggcacgcttctctcaattactaga
gaagaagcaaaagagatcataaaaaaagccggtggtatagttgtgaacagtatttctaag
caaatcgactacgttgtagctggagaaaaagcgggctcaaaacttgcaaaagccaatgag
cttggtattgcaatcatagaagaaaaaaccctcatagaattcacaaatgggaacaacaca
cctgctcttaagaaagagacaagctccaactaa
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