Neisseria mucosa FDAARGOS_260: A6J88_13375 Help Entry A6J88_13375       CDS       T04958                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism nsi  Neisseria mucosa FDAARGOS_260 Pathway nsi03030   DNA replication nsi03410   Base excision repair nsi03420   Nucleotide excision repair nsi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nsi00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     A6J88_13375    03410 Base excision repair     A6J88_13375    03420 Nucleotide excision repair     A6J88_13375    03430 Mismatch repair     A6J88_13375  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nsi03032]     A6J88_13375    03400 DNA repair and recombination proteins [BR:nsi03400]     A6J88_13375 Enzymes [BR:nsi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      A6J88_13375 DNA replication proteins [BR:nsi03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      A6J88_13375 DNA repair and recombination proteins [BR:nsi03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      A6J88_13375    NER (nucleotide excision repair)     GGR (global genome repair) factors      A6J88_13375    MMR (mismatch excision repair)     DNA ligase      A6J88_13375   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       A6J88_13375 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH_5 BRCT_2 5_3_exonuc Motif Other DBs NCBI-ProteinID:  ARC52066 UniProt:  A0ABM6JES7 LinkDB All DBs Position 2700172..2702643 Genome browser AA seq 823 aa AA seqDB search MNPTTQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQ RVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVI EPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNVKTVANIPLRLHIENPPELIEVRG EVLMLKADFAALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQG GFTAEEHIQELAYFRELGFSLPDGNFGCFKNIDEVLAFYEQMQQKRPSLPYEIDGMVVKV NSLAQQRELGFISRAPRWAIAHKFPAEEALTVVEAIDVQIGRTGAVTPVARLQPVFVGGV TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDDLKHQ QDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQG LIHFASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKEAADKASSENENG DAETVSGDLSERNTQTGKKQPTKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTL AQAFGSLEHVRRAPEPILACLPDIGTVVARSIAHFFAQDAQQAMIDELLAAGVAPQTQAV TIPPARHAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKALPADWQAWRSETQN AALLENLKTFFAQTSSENQEATISDDLNEAVAGKTFVLTGTLPTLKRDQAQALIEAAGGK VSGSVSKKTDYVVAGEAAGSKLEKANALGVAVLSEEELLAMLG NT seq 2472 nt NT seq  +upstreamnt  +downstreamnt atgaatccgaccacacaacacatccgccacctcaccgacctcctcaaccgctacgcctac gaatactataccctcgacgcgcccagcgtacccgatgccgaatacgacaaattattccgc gaactcgaagcgttggaacgaaaccatcccgagctcaaactgcccgacagcccgacccag cgcgtcggcggcgagcctctagcgggatttgccgaagtgcgccacgaagtgccgatgctg tcgctgaccaacgccttttccccgcaagatgaaaacggcgtgttcgatcatgccgaaatg tacgctttcgaccagcgcgtgcgcgacggcttggacggcggcaatcccgaatatgttatc gaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattggtgcag gcggcgacgcgcggcgacggcacgaccggcgaagacgttacccaaaacgtcaaaaccgtc gccaacatccccctgcggctgcatatcgaaaatccgcccgaactcatcgaagtacgcggc gaagtgctgatgctcaaagccgatttcgccgccctcaataaacgccaagccgaaaacggg caaaaaccctttgccaacccgcgcaatgccgccgccggcagcctgcgccaactcgattcg cgcatcaccgcgcaacgcaaactgcactttttcccctactccatcgcccgtcagcaaggc ggtttcacagccgaagaacacatccaagaactcgcctatttccgagaactcggcttcagc ctgcccgacggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttttacgaa caaatgcagcaaaaacgcccctccctaccctacgaaatcgacggcatggtcgtcaaagtc aacagcttggcgcaacagcgcgaactcggcttcatctcccgcgcgccgcgctgggcgatt gcccacaaattccccgccgaagaagccctgaccgtcgtcgaagccatagacgtgcaaatc gggcgcaccggcgcggttacccccgtcgcccgcctgcaacccgtattcgtcggcggcgta accgtcaccaacgctaccctgcacaatcaggacgaagtatcgcgcaaagacgtgcgcgtc ggcgataccgtcgtcgtgcgccgcgccggagacgtgattcccgaagtcgtgcgcgtgatt ttcgaacgccgcccgatgcaggaaaccgccgttgccgtttcagacgacctcaagcatcaa caagacgacctgttcgccgaaacaccgtccgccaaccaaacccaatccgttccgctccat aagccctaccgcctgccgacccattgccccatctgccgcagcgaaatcgaacgcgaagaa ggcgaagccgtcgcccgatgcagcggaggtatgctttgtcaggcacaacgcgcgcaaggc ttaatccacttcgcctcacgcaaagcgatggacatcgacggactcggtcaaaaacaaatc gagcaacttgtcgcccaagacctcgtccgccacttcgccgacctctaccgcctcgacatc ccgaccttgcaaaaaatgaaggaagcagcggataaagcgtcgtctgaaaacgaaaacggc gacgcagaaacggtttcaggcgacctgtctgaacgcaacacccaaaccggcaaaaaacaa ccgaccaagtgggcggaaaacatccttgcaggcatagaagccagcaaaacgcccgaactc gcccgctttctattcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctg gcgcaggcattcggctcgctggaacacgtccgccgcgcacccgaacccatcctcgcctgc ctgcccgacatcggcaccgtcgtcgcccgctccatcgcccacttcttcgcccaagacgcg cagcaggcgatgatagacgagctgctcgccgcaggcgttgccccgcaaacccaagccgtt accatcccgcccgcccgccatgccgagccgcaacgctggattgcccgcctgcccggtttc aaaatcagcgaaaacaaagcccaagccttatgggaactcgccggcaaaagcatagagggc ctgcaaaccgacaaagccctccccgccgactggcaagcatggcgcagcgaaacacaaaac gccgccctgctcgaaaacctgaaaaccttcttcgcccaaacgtcgtctgaaaaccaagaa gcaacgatttcagacgacctaaacgaagccgtagcaggcaaaacctttgtattaaccggc accctgcccaccctcaaacgcgaccaagcccaagccttaatcgaagccgcaggcggcaaa gtttccggcagcgtatccaaaaaaaccgactacgtcgtcgccggagaagccgccggcagc aagctggaaaaagccaatgccttgggtgtggcggtattgagtgaggaagagcttttggcg atgctgggctga

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