KEGG   Nocardia mangyaensis: BOX37_22355
Entry
BOX37_22355       CDS       T04582                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
nsl  Nocardia mangyaensis
Pathway
nsl03030  DNA replication
nsl03410  Base excision repair
nsl03420  Nucleotide excision repair
nsl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BOX37_22355
   03410 Base excision repair
    BOX37_22355
   03420 Nucleotide excision repair
    BOX37_22355
   03430 Mismatch repair
    BOX37_22355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsl03032]
    BOX37_22355
   03400 DNA repair and recombination proteins [BR:nsl03400]
    BOX37_22355
Enzymes [BR:nsl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BOX37_22355
DNA replication proteins [BR:nsl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BOX37_22355
DNA repair and recombination proteins [BR:nsl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BOX37_22355
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BOX37_22355
   MMR (mismatch excision repair)
    DNA ligase
     BOX37_22355
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BOX37_22355
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT HHH_5 Nlig-Ia PTCB-BRCT HHH Zn_Ribbon_1 DUF7575
Other DBs
NCBI-ProteinID: APE38630
UniProt: A0A1J0W2X5
LinkDB
Position
complement(4980988..4983084)
AA seq 698 aa
MEATSDQRVRWQKLADEVREHQFRYYVRDAPIISDGEFDTLLRELQALEEAHPDLRTPDS
PTQLVGGGFATEFTAVDHLERMLSLDNVFDYDELRTWASRVEAEAGANLHYLCEVKIDGV
ALNLVYENGRLVRGATRGDGRTGEDVTLNARTIADIPAELTPSADFPIPDLLEVRGEVYF
RLADFETLNAAIVAEGKPPYANPRNTAAGSLRQKDPAVTARRRLRMICHGFGRIEGYRPD
SLHEAYLALAAWGLPVSEHTRLVEGIDAVIERVAYWGEHRHDIEHEIDGQVIKIDQTALQ
RRLGSTSRAPRWAIAYKYPPEEATTTLLDIEVNVGRTGRVTPFAVMSPVSIAGSTVAMAT
LHNASEVKRKGVLIGDTVTIRKAGDVIPEVLGPVVDARTGAEREFVMPTHCPNCGTELAP
EKEGDADIRCPNQRHCPAQLRERVFHLAGRGAFDIEALGDKAADALLRSGAIVDEGDLFD
LDEQKLLTVPLFTNQKGQITQNGLRLLENLRTVQDRPLWRVLVALSIRHVGPTAARALAA
EFASLERIEAATVEELSATDGVGPTIAAAVAEWFAVDWHRAIVDKWRAAGVRMEDERDQS
IERHLEGLSIVVTGSLQTFTRDGAKEAILVRGGKAAGSVSKKTAFVVIGEAPGSKAAKAE
ELGVPILDEDGFRALLAHGPAAVTPEPAEQAPAQDLDG
NT seq 2097 nt   +upstreamnt  +downstreamnt
gtggaggcgacctccgatcaacgagtgcggtggcagaagctggccgatgaggtgcgtgag
catcaattccgctattacgtgcgggacgcgccgatcatcagtgacggcgagttcgacacc
ttgctgcgtgagttgcaggcgctggaggaggcacatccggatctgcggacgccggattcg
ccgactcagctggtcggcggcgggttcgccaccgagttcaccgcggtcgaccatctcgag
cggatgctctcgctggacaatgtgttcgactacgacgaactgcgcacctgggcgagccgg
gtggaggccgaggcgggggcgaacctgcactatctgtgcgaggtcaagatcgacggcgtc
gcgctgaacctggtctacgagaacggccgactcgtgcgcggcgccacccgcggcgacggg
cgcaccggcgaggacgtcaccctcaacgcgcgcaccatcgccgacatccccgccgaactc
accccgagcgcggacttcccgatcccggacctgctcgaggtgcgcggcgaggtgtacttc
cggctcgcggacttcgagacgctcaacgccgccatcgtcgccgaaggcaaaccgccgtac
gcgaatccgcgcaacaccgccgcgggctcgctgcgccagaaggacccggcggtcaccgcg
cggcgcaggctgcggatgatctgccacggcttcggccgcatcgagggctatcggccggac
tccctgcacgaggcctacctggcactggcggcctggggtctgccggtctccgagcacacc
cggctggtcgagggcatcgacgcggtgatcgagcgggtcgcctactggggcgaacaccgc
cacgacatcgagcacgagatcgacggtcaggtgatcaagatcgatcagaccgccctgcaa
cgccgactcggttccacctcccgcgcgccgcgctgggccatcgcctacaagtacccgccc
gaggaggccacgaccacgctgctcgacatcgaggtcaacgtgggccgcaccggccgggtc
acgccgttcgcggtgatgtcaccggtgagtatcgcgggctcgacggtcgccatggccacc
ctgcacaacgcctcggaggtgaaacgcaagggtgtgctgatcggggacacggtcaccatc
cgcaaagccggtgacgtgattcccgaggtgctcggcccggtggtcgacgcgcgcaccggc
gccgaacgcgagttcgtgatgcccacgcactgcccgaactgcggcaccgaactggcaccg
gagaaggagggcgacgccgacatccgctgccccaaccagcggcactgtccggcgcagctg
cgtgagcgggtgttccacctcgccgggcgcggcgccttcgacatcgaggcgctcggcgac
aaggccgccgatgccctgctgcgctccggcgcgatcgtcgacgagggtgacctgttcgac
ctggacgagcagaagctgctcacggtccccctgttcaccaatcagaaaggccagatcact
cagaacggtctgcgcttgttggagaacttgcggaccgtgcaggaccgtccgctgtggcgg
gtgctcgtcgcgctgtcgatccgccacgtcggtccgaccgccgcgcgtgcgctggccgcg
gagttcgccagcctggaacgcatcgaagccgcgacggtggaggaactctcggccaccgac
ggcgtcggcccgaccatcgccgcggcggtcgcggaatggttcgccgtcgactggcatcgc
gccatcgtcgacaagtggcgtgcggcgggtgtccgcatggaagacgagcgcgaccagtcc
atcgaacgccatctcgagggcctgtcgatcgtggtcaccggctccctgcagaccttcacc
cgcgacggcgccaaggaggcgatcctggtccgcggcggcaaggccgccgggtcggtgtcg
aagaagaccgccttcgtggtgatcggcgaagcgcctggttccaaggccgccaaggccgag
gagctcggtgtccccatcctggacgaagatggtttccgcgccctcctggcgcacggtccc
gccgccgtcaccccggagcccgccgaacaggcaccagcccaagatctggacggttga

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