Neotabrizicola shimadae: JO391_08725
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Entry
JO391_08725 CDS
T08148
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JO391_08725 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_08725 (nth)
Enzymes [BR:
nsm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JO391_08725 (nth)
DNA repair and recombination proteins [BR:
nsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JO391_08725 (nth)
Prokaryotic type
JO391_08725 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QYZ71561
UniProt:
A0A8G1EEM6
LinkDB
All DBs
Position
complement(1824820..1825467)
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AA seq
215 aa
AA seq
DB search
MTRQLPYAQMKAIFSRLREIEPEPKGELEHVNAFTLLVAVALSAQATDVGVNKATRGLFP
VADTPEKMLALGEEGLIEKIKTIGLFRNKAKNVIKLSRILIDEYGGEVPSSRAALMSLPG
VGRKTANVVLNMWFHQPAQAVDTHIFRVGNRTGIAPGKDEGAVERAIEDNVPAEFLQHAH
HWLILHGRYICVARKPKCGICPIRDWCLYDQKEDA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacagcttccctatgcccagatgaaggccatcttttcccgcctgcgggagatc
gagcccgaaccgaagggagagttggagcatgtgaacgctttcacccttctggttgccgtg
gccctttcggcgcaggcgacggatgttggggtgaacaaggcgacgcgcgggctgttcccc
gttgccgacacgccggaaaagatgctggcgcttggtgaggagggtctgatcgagaagatc
aagaccatcggcctttttcgcaacaaggcgaagaacgtcatcaagcttagccgcatcctg
attgatgagtatggcggcgaggtgccctcttcccgcgcggcgctgatgtcgctgccgggc
gtggggcgcaagacggcgaatgtggtgttgaacatgtggttccaccagccggcgcaggcg
gtggatacccatatcttccgcgtcggcaaccgcaccggcattgcgccgggcaaggacgag
ggcgcggtggaacgcgccatcgaggacaatgtgccggccgagttcctgcaacacgcgcat
cactggctgatcctgcatggacggtatatctgcgtggcgcgcaaacccaaatgcggcatc
tgcccgatccgggactggtgcctgtacgatcagaaggaagacgcatga
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