Neotabrizicola shimadae: JO391_09690
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Entry
JO391_09690 CDS
T08148
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm01501
beta-Lactam resistance
nsm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JO391_09690
01503 Cationic antimicrobial peptide (CAMP) resistance
JO391_09690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsm03036
]
JO391_09690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsm02000
]
JO391_09690
01504 Antimicrobial resistance genes [BR:
nsm01504
]
JO391_09690
Chromosome and associated proteins [BR:
nsm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JO391_09690
Transporters [BR:
nsm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JO391_09690
Antimicrobial resistance genes [BR:
nsm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JO391_09690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
OEP
Motif
Other DBs
NCBI-ProteinID:
QYZ71732
UniProt:
A0A8G0ZX27
LinkDB
All DBs
Position
2013263..2014387
Genome browser
AA seq
374 aa
AA seq
DB search
MPSLRLARQSLAVCLVACLVLPAAAQTSGSQASAPLPAVIVAPATMEEVGASARFNGRAV
AVQKVDLRARVSGFLVEQGFKEGAAVEQGQTLFWIDDGEYAAALAQADASVAAAEASLTL
ANLEFERQNELLNRKTGTQQNVDRTKAEADKAKAEVDRLKAQRDVAALNLSYTIITAPFA
GQIGLANADVGALVGPDTGPLATIVQSNPIYVEFPVPERVLLETEAAVKAAGAGPVAISL
TLSDGSVFPNEGRLNFADVEVSESTDTILARAVFDNPDGVLRDGSLVSVTIKGNIGGAEL
TVPQQAVQRDVTGAYVLTVGDDGTVERKPVTVSRTVQGLAVITEGLTEGEMVITEGVNKA
RPGAKVDAAPAEAN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgttgcgcctcgcccgtcagtcccttgccgtctgcctcgtcgcctgtctggtt
ctacctgcggctgcacagacttcgggctctcaggcttccgcgccgttgcccgccgtgatc
gttgcccccgcgacgatggaagaggttggcgcatcggcgcgcttcaacggtcgggccgtg
gccgttcaaaaggtcgacctgcgcgcgcgcgttagcggtttcctggttgagcagggtttc
aaagagggcgcagccgtcgaacagggacaaacgctgttctggatcgatgatggcgaatat
gcagctgccttggcccaggccgatgcatctgttgcggcggctgaggcgtcgctgacgctc
gccaacctggagttcgagcggcagaacgaacttctgaaccgcaagaccggcacgcaacag
aacgtggaccgcaccaaggccgaggccgacaaggccaaggccgaggtcgaccgcttgaag
gcacaacgagacgtggcggcactgaacctgtcctacacgatcatcacggccccctttgcc
ggccagataggtcttgccaatgccgatgtcggcgcactggtcggccctgacaccggcccg
ctggccaccatcgtccagtcgaacccgatctatgtggagtttccagtccccgaacgggtg
cttctggaaaccgaagccgcagtgaaggccgccggtgcagggccggtcgcgatttcgctg
accctttcggacggcagcgtcttcccgaacgagggtcgcctgaacttcgccgacgtcgag
gtttcggaatccaccgacacgatccttgcccgcgccgtgttcgacaaccccgatggggtg
ctgcgcgacggctcgttggtctcggttaccatcaagggcaacatcggcggggccgaactg
accgtgccgcagcaggccgtgcagcgtgacgtgaccggcgcctatgtcctgaccgtcggc
gatgatggcacggtcgaacgcaagcccgtcaccgtatcgcgcaccgtgcagggcctggcg
gtcatcaccgaaggactgaccgaaggtgaaatggtcatcaccgagggcgtcaacaaggcc
cgccccggcgccaaggttgacgctgcaccggccgaggcgaactga
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