Neotabrizicola shimadae: JO391_12675
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Entry
JO391_12675 CDS
T08148
Name
(GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00630
Glyoxylate and dicarboxylate metabolism
nsm00660
C5-Branched dibasic acid metabolism
nsm00680
Methane metabolism
nsm00720
Other carbon fixation pathways
nsm01100
Metabolic pathways
nsm01120
Microbial metabolism in diverse environments
nsm01200
Carbon metabolism
Module
nsm_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JO391_12675
00660 C5-Branched dibasic acid metabolism
JO391_12675
09102 Energy metabolism
00720 Other carbon fixation pathways
JO391_12675
00680 Methane metabolism
JO391_12675
Enzymes [BR:
nsm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
JO391_12675
4.1.3.25 (S)-citramalyl-CoA lyase
JO391_12675
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Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
QYZ68626
UniProt:
A0A8G0ZNJ2
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Position
complement(2612358..2613320)
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AA seq
320 aa
AA seq
DB search
MSFRLQPPAPARPNRCQLFGPGSRPALFAKMAASEADVINLDLEDSVAPTDKAEARANVI
KAVSDVDWGSKTLSVRINGLDTPWWYRDVVDLLEQAGDRLDQIMIPKVGCAADIYAVDAL
VTAVERAKGRAKPIGFEVIIESAAGISHVEEIAAASPRMQAMSLGAADFAASMGMATTGI
GGTQENYYMLREGAKYWSDPWHWAQAAIVAACRTHGLLPVDGPFGDFSDDEGFRAQALRS
ATLGMVGKWAIHPRQVALANEVFTPSAAAVAEAREILAAMAEAKARGEGATVYKGRLVDI
ASIKQAEGIVRQADLLDGKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccgccttcagccccccgctccggcccgcccgaaccgctgccagctgttcggc
ccgggctcgcgccccgctctttttgccaagatggcggcctctgaggcggatgtgatcaac
ctcgaccttgaggattcagtggcgccgaccgacaaggccgaggcgcgggcgaatgtcatc
aaggcggtgtccgacgtggactggggcagcaagaccttgtcggtccggatcaacgggctg
gatacgccctggtggtaccgggatgtggtggacctcctggagcaggcgggagaccggctg
gaccagatcatgatccccaaggtcggctgcgcggcggacatctatgccgtcgacgccttg
gtcacggcggtggagcgggcgaaggggcgggcgaagccgatcgggttcgaggtcatcatc
gagtcggccgccggcatctcccatgtcgaggagatcgcggcggcctcgccacggatgcag
gcgatgagcctgggggcggcggactttgcggccagcatggggatggcgaccaccggcatc
ggggggacgcaggagaactactacatgcttcgggagggggcgaagtactggtccgatccc
tggcactgggcgcaggcggccatcgttgcggcttgccggacgcatgggctgttgccggtg
gacgggcccttcggcgacttcagcgatgacgaggggttccgggcgcaggcgctgcggtcg
gcgacgctggggatggtgggcaagtgggcgatccatcccaggcaggtggcgctggccaac
gaggtcttcacgccctctgcggcggcggtggccgaggcgcgggagatcctggcggccatg
gcagaggccaaggcgcggggcgagggagccacggtctacaagggccggctggtggacatc
gcctcgatcaagcaggcggaggggatcgtgcggcaggccgatcttctggatggcaagggg
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