Neotabrizicola shimadae: JO391_16005
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Entry
JO391_16005 CDS
T08148
Name
(GenBank) Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain
KO
K00441
coenzyme F420 hydrogenase subunit beta [EC:
1.12.98.1
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00680
Methane metabolism
nsm01100
Metabolic pathways
nsm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
JO391_16005
Enzymes [BR:
nsm01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.98 With other, known, physiological acceptors
1.12.98.1 coenzyme F420 hydrogenase
JO391_16005
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GFIT
Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
Fer4_15
Fer4_13
Fer4
Motif
Other DBs
NCBI-ProteinID:
QYZ69225
UniProt:
A0A8G0ZV61
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Position
complement(3296314..3297573)
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AA seq
419 aa
AA seq
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MTVQDPITRAVARNLCTGCGACAALTPAAIRMVEDPVHGRRPVVAATQGGRIAAQEAAAV
CAGLGADHRSLPRADATDLAWGPVLAVWQGWAADDEIRHRGSSGGAVTALALFALQSGLA
RGVAHVAARKDDPRRNEATISRTRADLLRGAGSRYAQASPAEALAEIAAGADPVAFIGKP
CDVASVSRAAAADPSLAGKLPLTIAIFCAGAPNLRATDRLLDHLGMPGDATPTALRYRGD
GWPGLMQARWRDASGAETESRGITYAEGWGRILQADRRWRCRICTDHTGAFADISVGDPW
HEAPEGETAAGRSLIVARTARGRRLIESAIAAGALVAVPEARDAIARAQPNLQAAQGAVW
GRRLAMRAVGLPVPADRGLPLFAAWCALPLRAKLSSVAGTLRRIWRNRLWQPVEMESRP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccaagacccgatcacccgcgccgtggcgcgcaacctgtgcaccggctgcggg
gcctgcgccgccttgacgccagcggcgatccgcatggtggaagaccccgtgcatggccgc
cgcccggtggtcgccgcaacgcaagggggacgcatcgccgcccaagaggcagccgcggtc
tgcgccggcctcggcgccgatcaccgcagcctgccgcgtgccgatgcgacagacctcgcc
tgggggccggtgcttgccgtctggcagggttgggcagcagatgacgagatccgccatcgc
ggcagttcgggcggcgcggtcaccgcgctggcgctgttcgcgctgcaatcgggcctggcc
cgcggcgtggcccatgtcgccgcccgcaaggacgatccccgccggaacgaagccaccatc
agccgtacccgcgccgatctgcttcgcggtgcgggctcccgctacgctcaggccagcccg
gccgaggctctggccgaaatcgcggcgggggccgatcccgtggccttcatcggaaagccc
tgtgacgtcgcaagcgtctcccgtgctgccgcggccgatccgtcactggccggcaagttg
cccctgaccattgccatcttctgcgccggggcaccgaacctgcgggcgacagaccggctg
ctcgaccatctggggatgcccggggacgcgaccccgaccgcactgcgctatcgcggcgac
ggctggccggggttgatgcaggcccgctggcgcgacgcttcgggcgccgagaccgagagt
cgaggcatcacctatgccgagggttggggccgcatccttcaggccgaccggcgttggcgc
tgccgcatctgcacggatcacaccggagcctttgccgatatctcggtgggcgacccctgg
catgaagcccccgagggcgagaccgccgccggccgttccctcatcgtggcgcgcactgcg
cgcgggcggcggctcatcgagtccgccatcgccgccggcgcgctggtggcggtgcccgag
gcacgcgatgcgatcgcgcgggcccagcccaaccttcaggcggcacagggcgcggtctgg
ggccgccgactcgcgatgcgcgcggttggcctgcccgtccccgccgaccgcggcctgccg
ctcttcgcggcctggtgcgcgctcccgttgcgggcaaagctttcctctgtcgccggaacc
ctgcgccgcatctggcgcaaccggctctggcagccggtggaaatggagtcccggccatga
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