Nodularia sphaerocarpa: BDGGKGIB_02697
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Entry
BDGGKGIB_02697 CDS
T08134
Symbol
yodJ
Name
(GenBank) Putative carboxypeptidase YodJ
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00550
Peptidoglycan biosynthesis
nsph01100
Metabolic pathways
nsph01502
Vancomycin resistance
nsph02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDGGKGIB_02697 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDGGKGIB_02697 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BDGGKGIB_02697 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nsph01002
]
BDGGKGIB_02697 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
BDGGKGIB_02697 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
nsph01504
]
BDGGKGIB_02697 (yodJ)
Enzymes [BR:
nsph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
BDGGKGIB_02697 (yodJ)
Peptidases and inhibitors [BR:
nsph01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
BDGGKGIB_02697 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
BDGGKGIB_02697 (yodJ)
Antimicrobial resistance genes [BR:
nsph01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
BDGGKGIB_02697 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF2749
Motif
Other DBs
NCBI-ProteinID:
ULP73044
LinkDB
All DBs
Position
3222443..3223261
Genome browser
AA seq
272 aa
AA seq
DB search
MNKARFSGQPHNLSGDSSEEDIPVALRDSPEAAPKRLSPTLILLITGVSGLIVLGLISSF
WFFVIAPRNTVEPQAASNGTTTTDTQSSDSVNRQNNNLDALLGHLTYPEALESELLPITA
DGRIRLRKVAAERYKNMAQAARREGVILVAISGFRSVKDQEQLFFGIGARRNQTPAERAS
VSAPPGHSEHHTGYAVDIGDGAVPATNLQTNFENTKAFRWLEGNAARFGFEISFPENNPQ
GVSYEPWHWRFVGDRHSLELFYKARNLNTTQP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaagcccggttttctggacaaccgcataacttatcaggtgactctagtgaagaa
gatattcccgtagctttacgcgatagccctgaagcagcacctaaacgactttcgccaact
ctaattttactaatcactggagtatccgggttaatcgtcctgggtttaattagtagtttt
tggttctttgtcatcgcacccagaaacacagttgagcctcaagctgcatctaatggcaca
actaccacagatacacaatctagtgattctgtcaataggcaaaataataatcttgatgcg
ctgttgggtcatttgacatacccagaagcgctagagtcagaactattaccaattacggca
gatgggcgaattagactgcgaaaagttgccgccgaaaggtataagaacatggcgcaagcg
gcgcgacgtgaaggtgtaatattagtggcaatttctggttttcgctcagttaaagatcag
gaacagttattttttgggattggtgctagacgcaatcaaaccccagccgaaagagcatct
gtcagtgcgccccctggacacagtgaacatcatacaggctacgctgtggatataggagat
ggcgcagtcccagcaactaatctgcaaaccaactttgaaaataccaaggcttttcggtgg
ttagaaggaaatgcggcgcgttttggctttgaaatttcctttcctgagaataatcctcaa
ggtgtgagttatgaaccttggcactggcgttttgtaggcgatcgccatagcctagaatta
ttttacaaagccagaaatttaaacaccacacaaccatga
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