Nocardia seriolae: NS506_06637
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Entry
NS506_06637 CDS
T04599
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nsr
Nocardia seriolae
Pathway
nsr03030
DNA replication
nsr03410
Base excision repair
nsr03420
Nucleotide excision repair
nsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NS506_06637
03410 Base excision repair
NS506_06637
03420 Nucleotide excision repair
NS506_06637
03430 Mismatch repair
NS506_06637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsr03032
]
NS506_06637
03400 DNA repair and recombination proteins [BR:
nsr03400
]
NS506_06637
Enzymes [BR:
nsr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NS506_06637
DNA replication proteins [BR:
nsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NS506_06637
DNA repair and recombination proteins [BR:
nsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NS506_06637
NER (nucleotide excision repair)
GGR (global genome repair) factors
NS506_06637
MMR (mismatch excision repair)
DNA ligase
NS506_06637
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NS506_06637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-ProteinID:
APB00668
UniProt:
A0ABC8B274
LinkDB
All DBs
Position
complement(6955619..6957703)
Genome browser
AA seq
694 aa
AA seq
DB search
MEITAASGDERVEWQRLAEEVRDHQFRYYVRDAPIISDGEFDELFNRLAALEEAHPDLRT
PDSPTQLVGGGFTTEFAPVDHLERMYSLDNVFNEDEMRQWIAKVEADAGADIDYVCEVKI
DGVALNLVYEDGRLVRGATRGDGATGEDVTLNARTIEDIPHELTHSADFPVPKLLEVRGE
AYMTLADFAALNAGIVAEGKPPYANPRNTAAGSLRQKDPAVTARRRLRMICHGFGRLEGF
APESQHEAYRALASWGLPVSAHTVLVQGADAVVDRINYWGVHRHDIEHEIDGQVIKVDEF
SLQRRLGATSRAPRWAIAYKYPPEEATTKLLDIQVNVGRTGRVTPFAVMAPVTVAGSTVA
MATLHNASEVQRKGVLIGDTVTIRKAGDVIPEVLGPVVDARDGSERAFVMPTHCPECGTE
LAPAKEGDADIRCPNQQYCPAQLRERVFHVAGRGAFDIEALGYEAAIDLLKSGAIADEGD
LFSLDEDKLLTTTLFTNKNGTLSANGKRLLENLESAKDRPLWRVLVALSIRHAGPTAARA
LATAFGSMDRIREASPEELAATDGVGPTIAAAVTEWFTVPWHLDIVDKWAAAGVRMEDER
DESIERNLEGLSIVVTGSLENFTRDGAKEAILIRGGKAAGSVSKKTAFVVIGDSPGSKAA
KAEELGVPILDEAGFVKLLAQGPDAFSADLEVAD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaccgcggcgagcggggacgagcgcgtcgagtggcagcggctggcggaggag
gtccgcgaccaccagttccgctactacgtgcgggacgcgccgatcatcagcgacggcgag
ttcgacgagctgttcaaccggttggcggcgctcgaggaggcgcacccggatctacgcacc
ccggattccccgacccagctggtcggcggcggattcaccaccgagttcgcgccggtcgat
cacctggagcggatgtactcgctggacaacgtcttcaacgaggacgagatgcggcagtgg
atcgccaaggtggaggccgacgccggcgccgacatcgactacgtctgcgaggtgaagatc
gatggtgtcgcgctcaatctcgtctacgaggacggcaggctggtgcgcggcgcgacccgt
ggtgacggcgccaccggcgaggacgtcaccctcaatgcccgcaccatcgaggacattccg
cacgagctgacccacagcgccgacttcccggtcccgaagctcctggaagtgcgcggcgag
gcgtatatgacgctggccgacttcgcggcgctcaatgccgggatcgtcgcggaaggcaaa
ccgccgtacgcgaatccgcgcaataccgcggccggttcgctgcggcagaaggatccggcg
gtgacggcccggcggcggctgcgcatgatctgccacggcttcgggcggctcgagggtttc
gcgcccgagtcgcagcacgaggcgtatcgggcgctggcctcctggggcctgccggtctcg
gcgcacacggtgctggtgcagggtgccgacgcggtggtcgaccgcatcaactactggggc
gtgcaccgccacgatatcgagcacgagatcgacggccaggtcatcaaggtcgacgagttc
agcctccagcgccgcctgggcgcgacctcgcgcgcgccgcgctgggccatcgcctacaag
tacccgcccgaggaggccaccaccaagctgctcgacattcaggtgaatgtcggtcgcacc
ggccgggttacgccgttcgcggtgatggcgccggtgacggtcgccggttccaccgtggcc
atggcgaccctgcacaatgcctccgaggtgcagcgcaagggcgtgctcatcggcgatacc
gtgaccattcgcaaggccggtgacgtgatcccggaggtgctgggcccggtggtggacgcc
cgcgacggttccgagcgcgcgttcgtcatgcccacccactgccccgagtgcggcaccgag
ctggcccccgccaaggagggcgacgccgacatccgctgccccaaccagcagtactgcccg
gcgcagttgcgcgagcgggtattccacgtggccgggcgcggcgccttcgatatcgaggcg
ctgggctacgaggccgccatcgacctgctcaagtcgggtgcgatcgccgacgagggcgac
ctgttctcgctggacgaagacaagctgctcaccaccacgctgttcaccaacaagaacggc
accctgtccgccaatggcaaacgcctgctggagaatctggaatccgccaaggaccgcccg
ctctggcgcgtactggtcgccctctccatccgtcacgccggacccaccgcggcccgcgcc
ctggccaccgccttcggcagcatggaccgcatccgcgaagcctcgcccgaggaactcgcc
gccaccgacggcgtcggccccaccatcgccgctgcggtcaccgaatggttcaccgtgcct
tggcatctcgacatcgtcgacaagtgggccgcggccggggtccgcatggaggacgagcgc
gacgagtccatcgaacgcaacctcgagggcctgtccatcgtggtcaccggttccctggag
aatttcacccgtgacggggcgaaggaggccatcctcatccgcggcggcaaggcggccgga
tccgtctccaagaaaacagctttcgtcgtcatcggcgactccccgggctccaaggccgcc
aaggccgaggaactgggcgtccccatcctcgacgaggcgggcttcgtcaagcttctcgcg
cagggcccggacgcgttctccgcggacctggaagtcgccgactag
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