Notechis scutatus (mainland tiger snake): 113410120
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Entry
113410120 CDS
T09026
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04115
p53 signaling pathway
nss04145
Phagosome
nss04148
Efferocytosis
nss04350
TGF-beta signaling pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113410120 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113410120 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113410120 (THBS1)
04148 Efferocytosis
113410120 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
113410120 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113410120 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113410120 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113410120 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113410120 (THBS1)
Membrane trafficking [BR:
nss04131
]
Endocytosis
Phagocytosis
Opsonins
113410120 (THBS1)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113410120 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
EGF
TSP1_CCN
cEGF
Motif
Other DBs
NCBI-GeneID:
113410120
NCBI-ProteinID:
XP_026520347
Ensembl:
ENSNSUG00000006349
UniProt:
A0A6J1TP38
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MELSGGLFLFLMLGVCTTNRIPETSDDNSVFDLFELIGFGRKGAHKGQGVHSIKGLETSS
PAYRIDDANRIPAVSDHKFQDLLYAIQAEKGFILLANLRPIKKDAGTILAVERKDNSGYV
FKLVLNGKAKTLDLSVFPDEGNQSLVSVEEVKLPLARWSSITLFVQEDQAQLYVGCEKMT
NVELEIPIQDIFTRDLSNRARLRIAKGGVNDNFPGMLQNVRFVFGTTLETILRNKGCQIS
TGTLIKLDNPMNGSRPAIRTNYIGQKTKDVCGFSCDDLTKMFIELQSLRALVTKVEISVN
NMELIAPHNIKKGICLHNNVVYENTAEWTTDTCTTCTCQNSAVMCHKVSCPLMPCSNATV
PDGECCPRCWPSDSADDAWSPWSEWTTCSTTCGNGIQQRGRSCDRINHLCEGSSVQTRIC
NMQECDKRFRQNGAWSHWSPWSSCSVTCGSGLITRIRLCNSPLPQMGGKTCEGEARENMP
CQKSPCPINGNWGPWSPWDACPITCGGGIQKRSRLCNNPEPKFGGKDCIGDATATQICNK
QDCPIDGCLSNPCFAGSKCTSFPDGSWKCGPCPVGYQGNGIRCKDIDECQEVPDTCFVLG
GIHRCENTVPGYHCLPCPSRFTGPQPFGQSVEDAMANKQVCKPRNPCADGTHTCNKYAKC
IYLGHFSDPMYRCECKPGYAGNGIICGEDSDLDGWPNEDLQCVANATYHCTKDNCPKLPN
SGQEDYDDDGIGDACDDDDDNDNIPDDRDNCPFNFNPQQYDYDRDDVGDHCDNCPYNHNP
LQIDTDQNGEGDACAVDIDGDGILNERDNCQYVYNVDQTDSDLDGVGDQCDNCPMAHNPD
QMDSDSDRIGDKCDDNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGI
PDDRDNCRLVPNRDQVDSDGDGRGDACKDDFDNDNVNDIDDVCPENVHISETDFRRFQMI
PLDPKGTSQIDPNWIVRHKGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDDDYA
GFVFGYQSSSRFYVVMWKQVTQTYWEVQPTRAQGYSGLSIKVVNSTTGPGIHLRNALWHT
GNTVGQVKTLWHDPRQIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPLYDKTY
AGGRLGLFVFSQEMTFFSDLKYECKDQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggagctatccggtggtctctttctctttctgatgcttggagtctgcacaacgaaccgg
attccagagactagtgatgacaacagtgttttcgatctctttgagttaattggctttggc
cgcaagggagctcacaaaggccagggggtacattccatcaaaggactggagacttccagc
cctgcctaccgcatagatgatgccaaccgtatcccggcagtttccgaccacaaatttcaa
gaccttctttatgccatccaagccgagaagggcttcatcttgttagctaatcttcgcccc
ataaagaaggacgctggcaccatcctggccgtggagcgcaaggacaattctggctacgtt
tttaagttggtgctcaacggcaaggcaaaaactttggacctgagcgtctttcctgatgaa
ggcaaccaaagtttggtgtcggtggaggaggtgaagttgcccctggcgcgatggagtagc
atcactctctttgtgcaagaggatcaggctcagctctatgtgggctgtgaaaaaatgaca
aatgttgagctggaaattcctatccaggacatcttcactcgggatctgtccaacagagcc
agactccgtattgctaaaggaggagtgaatgacaacttcccgggaatgctgcagaatgtt
cggtttgtgtttggaactacactggaaaccatcctgaggaataaaggctgtcaaatctct
actggaacacttattaaattagacaatcccatgaacggctcccgtccagccattcgcacc
aactacattggccagaaaaccaaggacgtctgtggcttttcttgtgacgatctaaccaaa
atgtttatagaactgcaaagcctgcgtgccctggttacgaaggttgaaatctctgtcaac
aatatggaacttattgccccacataatataaagaaaggaatatgtctccacaataatgtt
gtgtatgaaaatacagctgagtggaccactgacacctgtaccacatgtacctgccagaat
tccgctgtaatgtgccataaagtgtcttgtccactcatgccttgttccaatgccacagtt
cctgatggtgaatgctgcccacgatgttggccaagcgattccgcagatgatgcttggtct
ccctggtctgagtggaccacttgctctacaacctgtggcaatgggattcagcagagaggt
cgctcttgtgacagaatcaaccatctttgtgaaggctcctcagtgcaaacacggatatgt
aacatgcaagaatgcgataagagattccgacagaatggtgcttggagccactggtcccct
tggtcttcctgctctgttacttgtggaagtgggttaatcactcgaatccgtctgtgcaat
tctccacttcctcagatgggaggcaaaacatgtgaaggagaggcacgagaaaacatgcct
tgccagaaaagcccatgcccaattaatgggaactggggaccatggtcgccttgggatgcc
tgtccaattacgtgtggaggaggcattcagaaacgcagtcgtctctgcaataatccagag
cccaaatttggagggaaggattgcattggtgatgcaacagccactcagatatgcaacaag
caggattgcccaatcgatggatgtctatctaatccttgttttgcgggaagtaaatgcact
agcttccctgatggttcctggaaatgtggcccatgccctgttggctatcaaggaaatgga
attagatgcaaggatattgatgaatgccaagaggtcccggatacttgctttgtacttggt
ggaatacacagatgtgagaatactgtacctggttatcactgcctgccttgtccctcccgc
ttcacaggaccacagccctttggtcaaagtgtggaagatgcaatggcaaacaaacaggta
tgcaagccacgtaatccatgtgctgatggaactcacacctgcaacaaatatgccaagtgc
atctaccttggacacttcagtgacccaatgtaccgctgtgaatgtaaaccaggatatgct
ggcaatgggattatctgtggagaagacagtgacttagatggatggccaaatgaggatctt
cagtgtgttgccaatgctacttatcactgcactaaagataattgccccaaacttcccaat
tctggacaagaagattatgatgatgatggaattggtgatgcctgtgatgatgatgatgac
aacgacaacattcctgatgatagggataactgtccattcaatttcaatccacaacagtat
gactatgatagggatgatgttggtgatcactgtgataattgcccatacaatcacaatcct
cttcagatagacacggaccaaaatggagaaggcgatgcctgtgctgtggatattgatgga
gacggcattcttaatgaaagagacaactgccaatatgtgtacaatgtggatcaaacggat
tccgacttggatggtgttggagatcagtgtgacaactgtccaatggcgcataatccagac
cagatggattcggattccgatcgcataggggataagtgtgatgacaaccaggatattgat
gaagatggccaccagaataatcttgataactgtccttatgtgcccaatgcgaaccaagct
gaccatgacaaagatgggaaaggggatgcctgtgaccacgacgatgacaatgatggtatt
cctgatgacagagataattgcagattggttcccaaccgtgaccaagttgattcagatggt
gatgggcggggagatgcatgcaaagatgattttgacaatgataatgttaacgacattgat
gacgtctgccctgagaatgttcacataagtgagacagacttccgtcgattccagatgatt
cccttggatccgaagggaacatctcaaattgatcccaactggattgttcgtcacaaaggc
aaagaactggttcagactgtcaactgtgatcctggacttgctattggttttgatgagttt
aatgctgttgacttcagtggtactttcttcattaacacggaaagagatgatgactacgct
ggctttgtatttgggtatcaatccagtagccgtttttatgtggtcatgtggaaacaagtt
acccaaacatattgggaagtacagcctaccagagctcaaggatattcgggtctttctatc
aaagtagtaaactccaccacaggtcctggaatacaccttcgaaatgccttgtggcatact
ggaaatactgttggacaggtaaagactctgtggcatgaccctcgtcagataggttggaaa
gatttcactgcttatagatggcgtctcagtcacaggccaaaaactggcttcattagagtg
gtaatgtatgaaggaaagaagatcatggctgactctggtcctctctatgacaaaacctat
gctggtggtcgcttaggactgtttgtcttctctcaggaaatgacattcttctctgatcta
aaatatgagtgcaaagatcaatga
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integrated database retrieval system
