Notechis scutatus (mainland tiger snake): 113410230
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Entry
113410230 CDS
T09026
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04120
Ubiquitin mediated proteolysis
nss04140
Autophagy - animal
nss04144
Endocytosis
nss04517
IgSF CAM signaling
nss04620
Toll-like receptor signaling pathway
nss04621
NOD-like receptor signaling pathway
nss04622
RIG-I-like receptor signaling pathway
nss05132
Salmonella infection
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113410230 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113410230 (TRAF6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113410230 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113410230 (TRAF6)
04140 Autophagy - animal
113410230 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113410230 (TRAF6)
04621 NOD-like receptor signaling pathway
113410230 (TRAF6)
04622 RIG-I-like receptor signaling pathway
113410230 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113410230 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
113410230 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113410230 (TRAF6)
04121 Ubiquitin system [BR:
nss04121
]
113410230 (TRAF6)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113410230 (TRAF6)
Membrane trafficking [BR:
nss04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113410230 (TRAF6)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
113410230 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
TRAF6_Z2
zf-C3HC4_4
zf-RING_5
Med21
TRAF3_RING
SlyX
RING_XB3-XBAT31
U-box
zf-RING_11
DUF4455
zf-TRAF_2
ATG16
DUF16
CENP-F_leu_zip
MTR4_beta-barrel
UPF0242
ADIP
DM
DUF948
PspA_IM30
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
113410230
NCBI-ProteinID:
XP_026520461
Ensembl:
ENSNSUG00000008969
UniProt:
A0A6J1TQ62
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSLLHSNTSFQINDQESDCCAAMASACCAGTKEESLTVPISNGTGGTLSNSFMEETQGYD
VEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGQKCPIDNEILLENQL
FPDNFAKREILSLIVKCPNKGCSQKMELRHLEDHQLHCGFASEKCSQCQGIFQKNQLQEH
MLECPQRQIACPNCAMCMPYEEKKVHDEICLLANVFCEYCNTVLIREQLPNHYDNDCPTA
PVSCTYSAFGCREKMQRNDLARHMQEFTQVHMRMMAQTLRSVSVTTPTSINFSGNVPFDP
SLFSQGMPPSCECSPEVQNFKETIQQLEGRLVRQDHQIRELIAKMETQQSQMGELKRTIR
TLEEKIADNEAQQCNGIFLWKIENFSAFLKAQEEERPVVIHSPGFYTGKPGYKLCLRLHI
QLPSVQRCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQSEGSPRHNHEEVMDTKPE
LLAFQRPMVYRNPKGFGYVTFMQLQALKQRTYIKDDILLVRCEVLTRFDLTSLRREGFHP
RSTDGTS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtctactacatagtaacacaagttttcaaataaatgatcaagagagtgactgctgt
gcagccatggccagtgcttgctgtgctgggaccaaggaggaaagcctcacggttcccatc
agcaatggtactggtgggacactttcaaactctttcatggaggaaacccaaggctatgat
gtggagtttgacccaccactggaaagtaaatatgaatgccctatctgcttaatggctcta
cgggaagcagtacagacaccgtgtggacatcgtttttgcaaagcttgcattgtcaaatcc
ctaagagacgcaggtcagaaatgtccaatagacaatgaaatcttactagaaaatcaactc
ttccctgataactttgcaaaacgtgaaatcctctcactgatagtgaaatgtcccaacaaa
ggctgcagtcaaaagatggagttaaggcacttagaggaccatcagctacattgtggattc
gcatcagaaaaatgttctcagtgtcaagggattttccagaagaaccagttgcaagaacat
atgctagaatgtccccagcggcaaattgcctgtccaaattgtgccatgtgtatgccttat
gaagaaaaaaaggttcatgatgaaatatgccttttggcaaatgtcttctgtgaatattgt
aatacagtactaatcagagaacagttgcctaatcattatgataatgactgccctactgct
ccagtatcatgtacctatagtgcatttggatgtagagaaaagatgcagagaaatgatttg
gcacgccacatgcaagaatttactcaggttcatatgagaatgatggctcagactcttcgg
agcgtcagtgttactactccaacttccattaatttttctggaaatgtacccttcgaccca
tcactcttctctcaaggcatgccaccttcatgtgagtgtagcccagaggttcagaacttc
aaggagactattcagcaactggaaggtcgtttagtaagacaagatcaccaaattagagaa
ctcattgcaaaaatggagacacaacagtcccagatgggagagctcaaacgcaccatccga
actctagaggaaaaaattgctgataatgaagcccaacaatgtaatggtattttcttgtgg
aaaattgaaaattttagtgcgttcctgaaagctcaggaggaagaaagacccgttgtgatc
catagtccaggtttctacacagggaaaccaggatataaactttgcttgcgtctgcatatc
cagttaccaagtgttcaacgttgtggtaactacatttctctttttgttcacaccatgcaa
ggggactatgacagtcatctcccttggcctttccagggcactatacgtctatcaattttg
gatcagtctgaaggatctccaaggcacaatcatgaagaagtaatggataccaagcctgag
ttgctagccttccaacgtcctatggtctatcgcaacccaaagggttttggatatgtaact
tttatgcagttgcaggccctgaaacaaagaacatacataaaagatgatattctcttggta
cgctgtgaagttttaacacgttttgacttaaccagtctccgaagagaaggttttcatcct
cgtagcacagatggaacatcatag
DBGET
integrated database retrieval system
