Notechis scutatus (mainland tiger snake): 113415036
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Entry
113415036 CDS
T09026
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04622
RIG-I-like receptor signaling pathway
nss04623
Cytosolic DNA-sensing pathway
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113415036 (DDX58)
04623 Cytosolic DNA-sensing pathway
113415036 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113415036 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nss04054
]
113415036 (DDX58)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113415036 (DDX58)
Pattern recognition receptors [BR:
nss04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
113415036 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
CARD_2
ResIII
DEAD
Helicase_C
DUF4602
Motif
Other DBs
NCBI-GeneID:
113415036
NCBI-ProteinID:
XP_026528045
Ensembl:
ENSNSUG00000007261
UniProt:
A0A6J1UCG5
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MWQTEPWALGKLKWKRCFTLKAYCFALNLKVRNLLQQFCLQSDFILEAVEQIQEQSNRPT
KAAELFLQSILQLKEDGWFRGFLDALKASDYTGLYQAIETWDFKTIESLEPHRELLKRIE
PAIQDIDVIDLQRYMGGCLQSQEWEEIHQISHNKGRRASASKLLECLCRSDKEHWPKMFQ
HALYEAGYDNHGKLWDLKGDYNTDVEMENDESSGVFQIQISEEAESDNLCGSSCSASDTF
QQTRYVPRKARSYQIELAEPALNGKHTMICAPTGSGKTFVSIMICEHHLCNRPAGQTGKV
VFLATKVPVYEQQKKVFQEHFKTDYKIDGICGENASSTSADIVIQQNDIIVMTPQTLLNS
LNNKGTNISLSTFTLMIFDECHNTTGNNPYNMLMFKYLDLKLKQGAHSLPQTCNYFRRIK
CAANNGGFFFIFTTVIRFIGTRPQNRFVDIVSQMMSKAEDLARQFYPIDDLSVMTKQCYG
TQKYEQWIVDVQKKAVVLQFKNTEEESRVCRALFICTQHLRKYNDALIINEDARNKDALD
YLKDYFEDIKNGNFDDIEEQLASNFEVNLLELTAASDDESNENPKLEDIQEILGEAYHVN
PETRTILFVKTRALLAALKNWIEETPELQFLKPQTLMGRGKRNHCTGMTLPNQKGTLDAF
KINGDSKLLIATSVADEGIDIVQCNLVLLYEYTGNIIKMIQVRGRGRAKDSKCILVTSKK
EEEEKERYNLQKEKMMNKAIEEVQSWDEKTFAKKINKLQKQQIKMLNSKKKPTEPKPWKD
NLVLLCGKCKTQACNTEDLRVIEESHHTVLGEKFKTRYTTKPHKAACNYGDFEKKSKVHC
ISCGHDWGIIVKYKTFEDMPIIKIESFSVQDVVSSKQFHFRKWKDVDFAMKDFDFEELSY
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaacagaaccatgggcacttggaaagctaaaatggaaaaggtgctttactttg
aaagcctattgttttgctttgaatcttaaagtgagaaatttactgcagcagttttgtcta
caatctgatttcattctagaggctgtggagcaaatccaagagcaaagcaaccggccaacc
aaggcagcagaactctttcttcagtctattctacagctcaaggaggatggatggttccgt
ggttttctggatgcactgaaagcatcggactatactggcctttatcaagcaattgaaaca
tgggatttcaagacaattgaaagtttggaacctcacagggaactgttgaaacgaattgag
cccgctattcaggatattgacgtcatagatcttcagaggtacatgggaggatgcctccaa
tctcaggaatgggaagaaattcatcagattagtcacaataaagggagaagagcaagtgcg
agcaaactgctggaatgcctgtgtagatcagacaaagaacattggcctaaaatgttccaa
cacgcactgtatgaggctggatacgacaatcatggcaagctgtgggatttgaaaggagat
tataatacagacgttgaaatggaaaatgatgaaagcagcggtgtttttcaaatacagatt
tctgaagaagcagaatctgataatctttgtgggagttcatgttcagcttcagataccttc
cagcagaccagatatgtgccgaggaaggcaaggagctatcagatagaacttgctgagcct
gctcttaatggaaaacacaccatgatttgtgcccctactggatctgggaagacttttgtg
tctattatgatatgtgagcatcatctctgcaacagacctgctgggcagacaggaaaagta
gtcttcctcgctacaaaagttccagtttatgaacaacagaagaaagtcttccaggaacac
ttcaaaactgactacaaaattgacggcatctgtggagaaaatgcttcctcgacttctgca
gacatagttattcagcagaatgatattattgtcatgacgccccagactcttttgaactct
ctgaataataaggggacaaatatttctctttcaacattcacattgatgatattcgatgag
tgccacaacactacagggaataacccatataatatgctaatgttcaagtatttggacctt
aaactgaagcaaggagcacactcgttacctcagacttgtaactattttagaagaattaaa
tgtgcagctaataatggcggtttcttttttatttttactacagttattaggtttattggg
acccgtccacaaaatcgttttgtagatattgtatctcagatgatgtcaaaagcagaggat
ctagcaagacaattttatcctattgatgacttgtctgtgatgacgaaacagtgttatggg
acccagaagtacgagcagtggattgtcgacgtgcagaagaaagctgtggtgttacagttt
aaaaataccgaagaagagagccgagtctgcagggctctgtttatttgcacgcagcacctc
cggaaatacaatgatgccttaatcatcaatgaagatgcccgaaacaaagatgctttggat
tatctgaaagattattttgaggatataaaaaatggcaactttgatgatattgaagaacag
ttggcttcaaattttgaagttaatttgttagaactcactgctgcttccgatgatgaatca
aatgaaaaccctaaattggaagatattcaagagattttgggagaggcatatcatgtcaat
cctgagacacgcactattctcttcgtgaagacaagagcgctgctggcagcattgaagaac
tggatagaagaaacgcctgaacttcagttcttgaagccacagacgctgatgggacgtggg
aaaagaaaccattgcacaggcatgaccctcccaaatcaaaaagggactttagatgccttc
aaaatcaatggggacagcaagctgctaatagcaacttcagtggctgacgaagggatcgat
attgttcagtgcaacctggtcctactatatgaatacacaggcaacatcatcaaaatgata
caagtcagaggtcgtggaagagcaaaagacagcaagtgcattcttgtgacgagcaaaaaa
gaagaggaagagaaggagaggtacaatttacaaaaagagaaaatgatgaacaaagctatt
gaagaggtacagagctgggatgaaaagacgtttgcaaagaagataaacaagttgcaaaag
cagcaaataaaaatgctaaattccaagaaaaaaccaacagaacccaaaccctggaaagac
aatctagtccttttgtgtgggaaatgcaaaacccaggcctgcaacacggaagacctccgg
gtgattgaggagtcgcaccacactgttttaggtgagaaatttaaaacacggtataccaca
aaacctcataaggcagcatgcaactacggggattttgagaaaaaatccaaggtgcattgc
atcagttgcggtcacgactggggaatcattgtgaagtacaagacctttgaggacatgccc
atcattaaaattgagagcttttctgtgcaggatgttgttagcagcaaacagtttcatttc
cgaaaatggaaggatgttgattttgcaatgaaagactttgattttgaagagctatcttac
tga
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