Notechis scutatus (mainland tiger snake): 113421268
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Entry
113421268 CDS
T09026
Symbol
AGRN
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113421268 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113421268 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nss00535
]
113421268 (AGRN)
Proteoglycans [BR:
nss00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
113421268 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Kazal_2
Kazal_1
EGF
SEA
CFAI_KAZAL
Laminin_EGF
Laminin_G_3
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
113421268
NCBI-ProteinID:
XP_026537342
UniProt:
A0A6J1V263
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MYAGENEEKTVCRGMLCGFGAVCEKNPADASQGVCVCKKATCPSVVAPVCGSDYSTYSNE
CELEKAQCNQQRRIKVMSKGACGSKDPCAEVVCSFGSTCVRSTDGQSAKCICMSFCGGLP
ENTVCGSDGKDYRSECHLNRHACDKQENIFKKFDGPCDPCKNTHNDMNRVCRVNPRSRRA
ELLPRPESCPLKKEPVCGDDGVTYENECVLHRTGAIRGIEIQKLRSGQCQVQDRCREECR
FNAVCLIRRGLARCSCERIICDGAYQPLCGRDSRTYFNDCERQKAECQQKAAIPVKHHGP
CDLAKPSPCLSVECQFGATCVVKNQEAICECQQVCQSVYDPVCGSDNLTYSNPCELDAMA
CALRKEIRMKHKGPCGEPLDPPAKERTNPACHAQEQPDFGLFGLNVQGKGGPYKISGEGD
FFQGSCHCDPVGSVRDDCEQMTGLCSCKPGITGTKCKQCPSGSKLGMSGCEKDLSAPSSC
SEMTCEFGASCVEVNGLPQCECPSLLCTEADASKVCGSDGVTYGDQCQLRTIACRQGKAI
EVKHLGQCAESHASHPTPPATQRPLDSVPPLAPQITTLAPELTRTSSSPWHSEDSVSHQS
QPVTRRIAKPAVLSTLPWTTQGIRQTTARPLLTAPVVPATTPMAYVESGSAEGSGDPELG
TSGDQEGSGTSSAGEEEMEEEKVPNPHLVERATCYNTPLGCCSDGKTPAIDAEGSNCPAT
KVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESVLDELFRNSEVKRDFRSVQV
RHLGQSSAVRVIVETHFDPATSYTAADIQRALLKQIKASKKKTILVKRPQQENIKFMDFD
WIPQLFTTTTTTTIATTMAPMAASSQRFPNTTNPRNLNPGWLNGKSSGGATTKRPSTSLP
TSMDRKKPVRPVPTTKKPPRPCDSHPCLHGGTCEDDGRDFTCSCPAGKGGAVCEKSIRYF
IPSFGGKSYLAFKMMKAYHTVRIAMEFRASELSGLLLYNGQNRGKDFVSLALVNGFVELR
FNTGSGTGVITSKVPIEPGQWHALVVNRNRRNGVLSVDGEPHMHGESPSGTDGLNLDTDL
FVGGAPEDQIDVVAERTSVTAGLKGCIRLLDVNNQMYDLREKGDDVLYGSGVGECGNNPC
QPNPCHHGGLCHTMEAEMFHCECLNGYTGPTCADERNPCDPNPCHLSATCLVLPEGGSKC
ECPMGRGGEFCESVAEMDQTVPFLPEFNGFSYLELNGLQTFVPELQDKMTMEVAFLSRNP
NGLIFYNGQKTDGKGDFISLALHNGYLEYRYDLGKGAAVIKSRDPVPLNTWVSVSLERNA
RKGIMRINNGERTLGESPLPHTSLNLKEPLYVGGAPDFSQLARAAAASASFDGAIQKISI
KGTPILKEKNIRSAVEISPFRSHPCTQKPSPCQNSGTCQPRLESYECTCPRGFFGTHCEK
VLTEKAAGDSDAIAFDGWTYIEYHNAVTKSQLTNEIPAPDALDYHLDLSEKALQSNYFEL
SIKTEATQGLILWSGKGLDRSDYIALAIVDGRVQMTYDLGSKPVILRSTVPINTNQWIQI
KASRVHRDGSLQVGNESPIMGSSPLGATQLDTDGALWLGGLEKLSLAHKLPKSFLTGFVG
CIRDVVVDRQELHLVEDALNNPTILHCAAK
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgggagaaaacgaagagaaaacggtttgtcgagggatgctgtgtggcttcggt
gccgtctgcgagaagaaccccgcggacgcttcccaaggcgtgtgtgtttgtaagaaagcc
acctgcccgtccgtggtggctccggtgtgcggttcggattattcgacctacagtaacgaa
tgtgagctggagaaagcccagtgcaaccagcagcgtcgcattaaagtcatgagtaaagga
gcttgtggttcgaaagacccctgcgcggaggtggtctgcagcttcggcagcacctgcgta
cgatccacggacgggcagtcggccaaatgtatctgcatgtccttttgtggcggcctcccc
gaaaacaccgtgtgcggcagcgacggcaaggactaccgcagcgagtgccacctgaaccga
cacgcctgcgacaagcaggagaacatcttcaagaagtttgatgggccgtgcgatccttgc
aaaaacactcacaacgacatgaatagagtttgtcgggtcaaccctcgctcgcgacgggcc
gagctgttgcccaggccggaaagctgccccttaaaaaaagagccagtgtgtggggacgat
ggggtgacctacgagaacgagtgcgtcttgcataggacgggggccatccggggcatcgag
atccagaagttgcgttcgggacagtgccaggtgcaagacagatgccgggaggagtgccgt
ttcaacgccgtgtgcctgatccgccggggcctcgcccgctgctcctgcgaacggatcatc
tgtgatggcgcctaccagcctctctgcggcagggacagccggacctacttcaatgactgt
gagcgccagaaggcggagtgccagcagaaggctgccattccagtcaagcaccatggacct
tgtgatctggccaagccgagcccctgcctgagcgtcgagtgccagtttggggccacctgc
gtggtgaagaaccaggaggccatttgcgagtgccaacaagtgtgccagagcgtctacgat
ccggtctgcggcagcgacaacctcacctacagcaacccttgcgagctggacgccatggcg
tgtgccctccggaaggagatccgcatgaaacacaagggcccttgcggtgagccgttagat
ccccctgctaaagagagaaccaacccggcttgccatgcacaggagcagcctgactttggt
ctgtttggtttgaatgttcaaggaaaagggggaccctataagatttctggggaaggggac
ttcttccagggatcctgccactgcgatcctgtgggatccgtgcgggatgactgcgaacag
atgaccggcttgtgttcctgtaaacccgggattactggcaccaaatgcaaacagtgtccc
agcggaagcaagctgggaatgtccggttgtgagaaagatctctctgccccctcgtcctgc
tctgaaatgacctgtgaatttggggcgtcgtgtgtggaagtgaacggccttccccagtgt
gagtgtccatcgttgctttgcacggaagctgacgcatccaaggtctgtggctctgatgga
gtgacctatggcgaccagtgtcagttgagaaccattgcttgccggcaagggaaggccata
gaggtgaaacacttgggccagtgtgcagaatcccatgccagccatcccaccccgcctgca
acccaacgccctctggactccgtcccccctctggctccccaaatcacaacgctggctccc
gagctaaccaggacatcctcctctccctggcattcagaagactccgtttcccaccagagc
cagccggtcacccgaaggatagccaagcctgctgtcctctccactcttccctggacgacg
cagggcatccgccagaccactgccagacccctcctgacagctcccgtggtccctgccacc
actccgatggcttacgttgaatcgggcagcgcggaaggcagcggagacccagaattgggc
accagcggggatcaggaaggcagcgggaccagctctgcaggggaggaagaaatggaagag
gaaaaggtgccaaatccacacctggtcgagagagcaacctgttacaacacccctctggga
tgctgctcggatggcaagactccagccattgacgccgaaggaagcaattgcccagccacc
aaagtcttccaaggggtcctgattttggaagaggtggaaggccaggaactgttttacact
ccggaaatggccgatcctaaatcggagctctttggggagacagcccgaagcattgaaagc
gtgctggatgagcttttccgcaactcagaggtcaagagggatttcaggagtgtccaggtg
cgacatctgggccaaagcagcgccgtcagggtcattgtggagacccattttgacccagct
acttcttacacggctgccgacatccagcgggcccttttgaagcagatcaaagcctctaag
aagaaaacaatcttggtgaagagaccccagcaagagaacatcaagttcatggactttgac
tggatccctcagctcttcaccaccaccaccactaccacaatcgccaccacgatggctccc
atggccgccagctcccagaggttccccaacaccaccaatccccggaacctgaacccggga
tggctgaatgggaaatcctccggaggagccaccaccaaaaggcccagcaccagccttcca
acctccatggaccggaagaaacccgtgcgccctgttcccaccaccaagaagcccccgcgg
ccctgtgattctcatccctgcttgcacggcggcacctgcgaggacgacggccgggacttt
acctgcagctgccctgcaggaaaaggaggagcggtttgcgagaagtccatccgatacttc
atccccagcttcggcgggaagtcctacctggcattcaaaatgatgaaggcttaccacacc
gtgcgcatcgccatggaattccgggcctccgagctgagtgggttgcttctgtacaacggg
cagaaccgcgggaaggacttcgtctccctggcgctggtgaacggattcgtggagctcagg
ttcaacaccggctcggggacaggcgtgatcaccagcaaggtgcccattgagccgggccag
tggcatgccctagtggtcaatcggaaccggaggaacggcgtgctatccgtggacggagag
ccccacatgcatggcgagagcccaagtgggaccgatgggttgaatctcgacaccgacctc
tttgtcggaggagccccggaagaccaaattgatgtggtggccgagcgcacatcggtcacc
gcgggcctgaagggctgcatccgcctgctggacgtcaacaaccagatgtacgacctgcga
gagaaaggcgatgacgtgctgtacggcagcggcgtgggcgaatgtggcaacaacccttgc
cagcccaacccctgccaccacggcgggctctgccacaccatggaggccgagatgttccac
tgcgagtgtctcaatggttatacaggacccacctgtgctgatgagagaaacccttgcgac
cccaatccgtgccatctctctgccacctgcttggtgttgccagaaggcggatcgaaatgc
gaatgccccatgggacgaggaggcgaattctgcgaatcagttgcagaaatggaccagacc
gtgccttttctgccggaattcaatggattctcctacctggagctgaacggtctccaaaca
tttgtgccggagctacaggataagatgaccatggaagtggctttcctgagcagaaatccc
aacggtttaattttctacaatggacagaagacggatgggaagggagattttatctccttg
gcccttcacaatggatacctggagtacagatacgacttgggcaaaggagccgctgtaatc
aagagcagagaccccgtccctctgaatacctgggtcagtgtttcgctggagaggaacgcg
cggaagggcattatgaggattaacaacggagaacggacgcttggtgaatcgccgttgccc
cacacctcacttaatttaaaggaacccctctacgtcgggggcgcaccggacttcagccaa
ctggctcgggctgccgcagcatctgctagctttgatggagccattcagaagatttccatc
aaagggacccccatcctgaaagagaagaacatccgcagcgctgttgagatctcccctttc
cgctcccatccctgcactcagaagcccagcccttgccagaacagcgggacctgccaaccc
cgtttggagagctatgaatgcacctgccccagaggcttcttcgggacccactgcgagaaa
gtcctcaccgagaaggcagctggagactccgatgccatcgccttcgacggctggacctac
atcgaataccataacgctgttaccaagagccaactgaccaatgagataccagctcccgat
gctttggattatcatctggacctcagcgagaaggctctgcagtccaactacttcgagctg
agcatcaaaaccgaagccacccagggactcatcttgtggagcgggaagggtctggatcga
tccgactacatcgctttggccatcgtggacggccgggtccaaatgacctacgaccttggc
tccaaacccgtgatccttcggtctaccgtcccaatcaacacgaaccagtggattcagatc
aaagcgtccagagtccatcgagatgggtccctccaagtcggcaacgaatctcccatcatg
ggttcctcgcctctcggagcaactcagctggacacagacggggccctttggctgggtggg
ttggagaagctgagcctggcccacaagcttcccaaatctttcctcaccggcttcgtgggc
tgcatacgagacgtggtggtggaccgccaagaactccatctggtagaggatgctttgaac
aaccccaccatattacactgcgcagccaaatga
DBGET
integrated database retrieval system
