Notechis scutatus (mainland tiger snake): 113422588
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Entry
113422588 CDS
T09026
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113422588 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113422588 (EFTUD2)
Spliceosome [BR:
nss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113422588 (EFTUD2)
Complex C
U5 SnRNP specific factors
113422588 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
113422588
NCBI-ProteinID:
XP_026539424
Ensembl:
ENSNSUG00000015598
UniProt:
A0A6J1V9R2
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDEMGRESKDLDEPDDDDDDDDMGDHDEDHPGMDVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFASSQYSICFTLGSFAKIYADMYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKIGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAEQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctgtatgatgaatttggaaattatattggtccagagcttgattctgat
gatgatgatgatgaaatgggtcgtgaatcaaaagatcttgatgagcctgatgatgacgac
gacgacgatgatatgggagaccatgatgaagaccaccctgggatggatgtagtgttgcat
gaggataaaaaatattatccaacagctgaggaagtatatggtcctgaagtagaaactata
gtgcaggaagaagacacacagcctcttacagaacctattattaaaccagtgaagaccaag
aaattttccctgatggagcaaacattgccagttactgtatatgaaatggattttcttgca
gatttgatggacaactcagaactgatccggaatgttacactttgtggacacctacaccat
ggcaagacttgttttgtggattgcctgatcgaacagacacatcctgagatcaggaagcga
tacgaccaggatctttgctatacagacattctattcactgagcaagagaggggtgttggg
attaaaagcaccccagtgaccattgtcctccctgacaccaagggcaaatcatttctcttc
aatatcatggatacacctggtcatgtaaacttctctgatgaggtcacagcaggtcttcgt
atttctgatggtgtggtactttttattgatgcagctgagggggtcatgctaaacactgag
cggttaatcaagcatgcagtacaggaaagattggcagtgacagtgtgtattaacaaaatt
gaccgactgatattagaactgaagctgccacctactgatgcctattataagttgcggcac
atagtagatgaagtcaacggcttaatcagcatgtattccacagatgagaacctgatcctt
tcacctcttttgggcaatgtttgttttgccagctctcagtatagcatttgtttcacactg
ggttcctttgccaagatatacgctgacatgtatggagacatcaattaccaggagtttgct
aagcgattgtggggagatatctatttcaaccccaagacgagaaaattcactaaaaaagcg
ccaacaagtagttcccagcgaagctttgtggaatttattcttgagcctctttataaaata
ctggcccaggtagttggagatgtagataccactttgcctcgaactttggatgaattggga
atccacctgaccaaggaagagttgaaattaaacatccgccccctcttgaggcttgtgtgc
aagaaattttttggagaattcacaggttttgtggatatgtgtgtgcaacacatcccctcc
cccaaaataggggcaaagaccaagattgagcatacttacacaggcggcgttgactctgac
ctaggagaggccatgagtgaatgtgatcctgatggtccacttatgtgccataccacgaaa
atgtatagtacagacgatggagtccaattccatgcatttggcagggtattaagtgggacc
atccatgcagagcaacctgtcaaggtccttggagaaaactacactctagaagatgaagaa
gattcacagatttgcactgtgggacgtctttggatctctgtagcaaggtaccatatagaa
gttaatagagtgccagctggtaactgggtgcttattgagggggtggaccagcctatcgtg
aagacagccactgtcactgagcccaggggcaatgaagaggctcagatattccgtcccttg
aagttcaataccacatctgtgatcaaaatagctgtggagcctgtaaatccatccgagctg
cccaaaatgttggatggcctgcggaaagtcaataagagctatccctctctcaccaccaag
gtagaagaatctggggaacatgtgatcttgggaacaggagagctctatcttgactgtgta
atgcatgatcttcggaaaatgtattcagagattgatatcaaggtagctgatcctgtggtc
acattctgtgagacagttgtggaaacatcttccctgaagtgttttgctgagacacccaat
aagaaaaacaagattacaatgattgctgagcctctagaaaagggtctggctgaagacatt
gagaatgaagttgtgcaaataacatggaacaggaaaaagctgggtgagtttttccagaca
aaatatgactgggatttgttggctgctcgttctatctgggcctttggaccagatgctact
ggaccaaacatcttggtggatgataccttaccttcagaggttgacaaaaccctcttaggt
tctgtgaaggacagtattgtgcaaggcttccaatgggggactagagaagggcccctgtgt
gatgaattgatccgtaatgtgaaatttaagatcttggatgctgttattgctcaggaacca
ttacatcggggaggtggacagatcattccaacagcccgccgggtggtatattctgccttc
ctcatggccacaccacggttaatggagccgtattatttcgtggaggtacaggctcctgct
gactgtgtctctgcagtgtacactgtcttggccaggcgtagaggccatgtaactcaagat
gcaccaatcccaggatcccctctgtatactatcaaagcctttatcccagctattgactct
tttggatttgagacagacctcaggacacatacccagggacaagcattctcgctctctgtc
tttcaccactggcaaattgtgccaggtgatcccctggacaagagcatcgtgatcagacct
cttgagccacagccagccccacacctagccagagaatttatgatcaaaactagacgcagg
aagggtctaagtgaggatgtgagcatcagcaagtttttcgatgaccctatgttgctggaa
ttggccaaacaggatgtggtgctgaactatcccatgtga
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integrated database retrieval system
